Virtual Genome Walking across the 32 Gb Ambystoma mexicanum genome; assembling gene models and intronic sequence
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Virtual Genome Walking across the 32 Gb Ambystoma mexicanum genome; assembling gene models and intronic sequence
Authors
Keywords
-
Journal
Scientific Reports
Volume 8, Issue 1, Pages -
Publisher
Springer Nature
Online
2018-01-08
DOI
10.1038/s41598-017-19128-6
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome
- (2017) Derek M Bickhart et al. NATURE GENETICS
- Advances in Decoding Axolotl Limb Regeneration
- (2017) Brian J. Haas et al. TRENDS IN GENETICS
- A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors
- (2017) Donald M. Bryant et al. Cell Reports
- The Theory and Practice of Genome Sequence Assembly
- (2015) Jared T. Simpson et al. Annual Review of Genomics and Human Genetics
- Initial characterization of the large genome of the salamander Ambystoma mexicanum using shotgun and laser capture chromosome sequencing
- (2015) Melissa C. Keinath et al. Scientific Reports
- Highly efficient targeted mutagenesis in axolotl using Cas9 RNA-guided nuclease
- (2014) G. P. Flowers et al. DEVELOPMENT
- Stochastic specification of primordial germ cells from mesoderm precursors in axolotl embryos
- (2014) J. Chatfield et al. DEVELOPMENT
- Sequencing and Assembly of the 22-Gb Loblolly Pine Genome
- (2014) A. Zimin et al. GENETICS
- Hellbender Genome Sequences Shed Light on Genomic Expansion at the Base of Crown Salamanders
- (2014) C. Sun et al. Genome Biology and Evolution
- Ensembl 2015
- (2014) Fiona Cunningham et al. NUCLEIC ACIDS RESEARCH
- Acquisition of Germ Plasm Accelerates Vertebrate Evolution
- (2014) T. Evans et al. SCIENCE
- CRISPR-Mediated Genomic Deletion of Sox2 in the Axolotl Shows a Requirement in Spinal Cord Neural Stem Cell Amplification during Tail Regeneration
- (2014) Ji-Feng Fei et al. Stem Cell Reports
- Comparative RNA-seq Analysis in the Unsequenced Axolotl: The Oncogene Burst Highlights Early Gene Expression in the Blastema
- (2013) Ron Stewart et al. PLoS Computational Biology
- Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
- (2013) Keith R Bradnam et al. GigaScience
- Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring
- (2012) S. Lamichhaney et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Toward almost closed genomes with GapFiller
- (2012) Marten Boetzer et al. GENOME BIOLOGY
- Genome walking in eukaryotes
- (2011) Claudia Leoni et al. FEBS Journal
- LTR Retrotransposons Contribute to Genomic Gigantism in Plethodontid Salamanders
- (2011) Cheng Sun et al. Genome Biology and Evolution
- Origin of amphibian and avian chromosomes by fission, fusion, and retention of ancestral chromosomes
- (2011) Stephen R. Voss et al. GENOME RESEARCH
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- A conserved mechanism for vertebrate mesoderm specification in urodele amphibians and mammals
- (2010) Gemma Swiers et al. DEVELOPMENTAL BIOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Positional distribution of human transcription factor binding sites
- (2008) Mark Koudritsky et al. NUCLEIC ACIDS RESEARCH
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started