LTR Retrotransposons Contribute to Genomic Gigantism in Plethodontid Salamanders

The Repatterning of Eukaryotic Genomes by Random Genetic Drift

(2011) Michael Lynch et al.   Annual Review of Genomics and Human Genetics

Co-evolution between transposable elements and their hosts: a major factor in genome size evolution?

(2011) J. Arvid Ågren et al.   CHROMOSOME RESEARCH

Transposable element origins of epigenetic gene regulation

(2011) Damon Lisch et al.   CURRENT OPINION IN PLANT BIOLOGY

Discovery of Highly Divergent Repeat Landscapes in Snake Genomes Using High-Throughput Sequencing

(2011) Todd A. Castoe et al.   Genome Biology and Evolution

Origin of amphibian and avian chromosomes by fission, fusion, and retention of ancestral chromosomes

(2011) Stephen R. Voss et al.   GENOME RESEARCH

Exploring Patterns and Extent of Bias in Estimating Divergence Time from Mitochondrial DNA Sequence Data in a Particular Lineage: A Case Study of Salamanders (Order Caudata)

(2011) Y. Zheng et al.   MOLECULAR BIOLOGY AND EVOLUTION

A multigenic perspective on phylogenetic relationships in the largest family of salamanders, the Plethodontidae

(2011) David R. Vieites et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The genome of the green anole lizard and a comparative analysis with birds and mammals

(2011) Jessica Alföldi et al.   NATURE

Drift and Genome Complexity Revisited

(2011) Kenneth D. Whitney et al.   PLoS Genetics

Statistical Inference on the Mechanisms of Genome Evolution

(2011) Michael Lynch   PLoS Genetics

Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies

(2010) Kateřina Ambrožová et al.   ANNALS OF BOTANY

Cell size is positively correlated between different tissues in passerine birds and amphibians, but not necessarily in mammals

(2010) J. Kozlowski et al.   Biology Letters

Artificial and natural duplicates in pyrosequencing reads of metagenomic data

(2010) Beifang Niu et al.   BMC BIOINFORMATICS

Correlated evolution of LTR retrotransposons and genome size in the genus eleocharis

(2010) František Zedek et al.   BMC PLANT BIOLOGY

Grass genome organization and evolution

(2010) Katrien M Devos   CURRENT OPINION IN PLANT BIOLOGY

The Evolution and Diversity of DNA Transposons in the Genome of the Lizard Anolis carolinensis

(2010) Peter A. Novick et al.   Genome Biology and Evolution

BAC library for the amphipod crustacean, Parhyale hawaiensis

(2010) Ronald J. Parchem et al.   GENOMICS

Genome-enabled development of DNA markers for ecology, evolution and conservation

(2010) ROBERT C. THOMSON et al.   MOLECULAR ECOLOGY

The Genome of the Western Clawed Frog Xenopus tropicalis

(2010) U. Hellsten et al.   SCIENCE

Dynamic Oryza Genomes: Repetitive DNA Sequences as Genome Modeling Agents

(2010) Navdeep Gill et al.   Rice

The genomic organization of Ty3 /gypsy -like retrotransposons in Helianthus (Asteraceae) homoploid hybrid species

(2009) S. Evan Staton et al.   AMERICAN JOURNAL OF BOTANY

Genic regions of a large salamander genome contain long introns and novel genes

(2009) Jeramiah J Smith et al.   BMC GENOMICS

CAN PARALLEL DIVERSIFICATION OCCUR IN SYMPATRY? REPEATED PATTERNS OF BODY-SIZE EVOLUTION IN COEXISTING CLADES OF NORTH AMERICAN SALAMANDERS

(2009) Kenneth H. Kozak et al.   EVOLUTION

Exploring Repetitive DNA Landscapes Using REPCLASS, a Tool That Automates the Classification of Transposable Elements in Eukaryotic Genomes

(2009) Cédric Feschotte et al.   Genome Biology and Evolution

Systematic artifacts in metagenomes from complex microbial communities

(2009) Vicente Gomez-Alvarez et al.   ISME Journal

Transposable Elements and Factors Influencing their Success in Eukaryotes

(2009) E. J. Pritham   JOURNAL OF HEREDITY

The Evolutionary Dynamics of Autonomous Non-LTR Retrotransposons in the Lizard Anolis Carolinensis Shows More Similarity to Fish Than Mammals

(2009) P. A. Novick et al.   MOLECULAR BIOLOGY AND EVOLUTION

Higher-level salamander relationships and divergence dates inferred from complete mitochondrial genomes

(2009) Peng Zhang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

(2009) Brian J. Haas et al.   NATURE

A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley

(2009) Thomas Wicker et al.   PLANT JOURNAL

Dynamics of transposable elements: towards a community ecology of the genome

(2009) Samuel Venner et al.   TRENDS IN GENETICS

Identification of repeat structure in large genomes using repeat probability clouds

(2008) Wanjun Gu et al.   ANALYTICAL BIOCHEMISTRY

Palaeogenomics of pterosaurs and the evolution of small genome size in flying vertebrates

(2008) C. L Organ et al.   Biology Letters

Retrotransposons Revisited: The Restraint and Rehabilitation of Parasites

(2008) John L. Goodier et al.   CELL

Chromodomains direct integration of retrotransposons to heterochromatin

(2008) X. Gao et al.   GENOME RESEARCH

Transposable elements and the evolution of regulatory networks

(2008) Cédric Feschotte   NATURE REVIEWS GENETICS

Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders

(2008) Rachel Lockridge Mueller et al.   ZOOLOGY