Resources for studies of iron walnut (Juglans sigillata) gene expression, genetic diversity, and evolution

Identification and validation of novel EST-SSR markers in olives

(2017) Alenka Baruca Arbeiter et al.   SCIENTIA AGRICOLA

Improvements in Genomic Technologies: Application to Crop Genomics

(2017) Yuxuan Yuan et al.   TRENDS IN BIOTECHNOLOGY

Rethinking the history of common walnut (Juglans regia L.) in Europe: Its origins and human interactions

(2017) Paola Pollegioni et al.   PLoS One

The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols

(2016) Pedro J. Martínez-García et al.   PLANT JOURNAL

Genetic diversity and population structure of common walnut (Juglans regia) in China based on EST-SSRs and the nuclear gene phenylalanine ammonia-lyase (PAL)

(2016) Huan Han et al.   Tree Genetics & Genomes

De Novo Assembly and Characterization of Bud, Leaf and Flowers Transcriptome from Juglans Regia L. for the Identification and Characterization of New EST-SSRs

(2016) Meng Dang et al.   Forests

Identification, development, and application of 12 polymorphic EST-SSR markers for an endemic Chinese walnut (Juglans cathayensis L.) using next-generation sequencing technology

(2015) Meng Dang et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

De novo assembly and characterization of transcriptome using Illumina sequencing and development of twenty five microsatellite markers for an endemic tree Juglans hopeiensis Hu in China

(2015) Yi-Heng Hu et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

Identification of antioxidant peptides released from defatted walnut (Juglans Sigillata Dode) meal proteins with pancreatin

(2015) Mu Gu et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

De novo transcriptome assembly of Ipomoea nil using Illumina sequencing for gene discovery and SSR marker identification

(2015) Changhe Wei et al.   MOLECULAR GENETICS AND GENOMICS

De novo assembly and characterization of the leaf, bud, and fruit transcriptome from the vulnerable tree Juglans mandshurica for the development of 20 new microsatellite markers using Illumina sequencing

(2015) Zhuang Hu et al.   MOLECULAR GENETICS AND GENOMICS

Transcriptome sequencing of two parental lines of cabbage (Brassica oleracea L. var. capitata L.) and construction of an EST-based genetic map

(2014) Nur Izzah et al.   BMC GENOMICS

Signatures of diversifying selection at EST-SSR loci and association with climate in naturalEucalyptuspopulations

(2014) Donna Bradbury et al.   MOLECULAR ECOLOGY

De novo transcriptome assembly, gene annotation, marker development, and miRNA potential target genes validation under abiotic stresses in Oenanthe javanica

(2014) Qian Jiang et al.   MOLECULAR GENETICS AND GENOMICS

Identification, validation and cross-species transferability of novel Lavandula EST-SSRs

(2014) Ayelign M. Adal et al.   PLANTA

Landscape genetics of Persian walnut (Juglans regia L.) across its Asian range

(2014) Paola Pollegioni et al.   Tree Genetics & Genomes

The genetic diversity and introgression of Juglans regia and Juglans sigillata in Tibet as revealed by SSR markers

(2014) Hua Wang et al.   Tree Genetics & Genomes

A Review of the Prevalence, Utility, and Caveats of Using Chloroplast Simple Sequence Repeats for Studies of Plant Biology

(2014) Gregory L. Wheeler et al.   Applications in Plant Sciences

Transcriptome sequencing of sea cucumber (Apostichopus japonicus) and the identification of gene-associated markers

(2013) Z. C. Zhou et al.   Molecular Ecology Resources

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

(2012) R. Peakall et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

De novo assembly and Characterisation of the Transcriptome during seed development, and generation of genic-SSR markers in Peanut (Arachis hypogaea L.)

(2012) Jianan Zhang et al.   BMC GENOMICS

Comparative mapping in the Fagaceae and beyond with EST-SSRs

(2012) Catherine Bodénès et al.   BMC PLANT BIOLOGY

Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery

(2011) Sukhjiwan Kaur et al.   BMC GENOMICS

De novo transcriptome assembly and polymorphism detection in the flowering plant Silene vulgaris (Caryophyllaceae)

(2011) DANIEL B. SLOAN et al.   Molecular Ecology Resources

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Genetic variation in walnuts (Juglans regia and J. sigillata ; Juglandaceae): Species distinctions, human impacts, and the conservation of agrobiodiversity in Yunnan, China

(2010) Bee F. Gunn et al.   AMERICAN JOURNAL OF BOTANY

A fast and cost-effective approach to develop and map EST-SSR markers: oak as a case study

(2010) Jérôme Durand et al.   BMC GENOMICS

Range-wide distribution of genetic diversity in the North American tree Juglans cinerea: a product of range shifts, not ecological marginality or recent population decline

(2010) SEAN M. HOBAN et al.   MOLECULAR ECOLOGY

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Nuclear and chloroplast DNA phylogeography reveal two refuge areas with asymmetrical gene flow in a temperate walnut tree from East Asia

(2010) Wei-Ning Bai et al.   NEW PHYTOLOGIST

Development of Juglans Regia SSR Markers by Data Mining of the EST Database

(2010) Rui Zhang et al.   PLANT MOLECULAR BIOLOGY REPORTER

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Genetic Diversity in Switchgrass Collections Assessed by EST-SSR Markers

(2008) B. Narasimhamoorthy et al.   BioEnergy Research