Comparative mapping in the Fagaceae and beyond with EST-SSRs

Plant development—a snapshot in 2012

(2012) Xuemei Chen et al.   CURRENT OPINION IN PLANT BIOLOGY

Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

(2011) Patricia Faivre Rampant et al.   BMC GENOMICS

Genome structure of cotton revealed by a genome-wide SSR genetic map constructed from a BC1 population between gossypium hirsutum and G. barbadense

(2011) Yu Yu et al.   BMC GENOMICS

Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

(2011) José Blanca et al.   BMC GENOMICS

Exploiting EST databases for the development and characterization of EST-SSR markers in castor bean (Ricinus communis L.)

(2011) Lijun Qiu et al.   BMC PLANT BIOLOGY

Construction of a potato consensus map and QTL meta-analysis offer new insights into the genetic architecture of late blight resistance and plant maturity traits

(2011) Sarah Danan et al.   BMC PLANT BIOLOGY

Scaffold filling, contig fusion and comparative gene order inference

(2010) Adriana Munoz et al.   BMC BIOINFORMATICS

Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak

(2010) Saneyoshi Ueno et al.   BMC GENOMICS

High-density linkage mapping and evolution of paralogs and orthologs in Salix and Populus

(2010) Sofia Berlin et al.   BMC GENOMICS

Chromosomal evolution in the plant family Solanaceae

(2010) Feinan Wu et al.   BMC GENOMICS

A fast and cost-effective approach to develop and map EST-SSR markers: oak as a case study

(2010) Jérôme Durand et al.   BMC GENOMICS

Multipoint-likelihood maximization mapping on 4 segregating populations to achieve an integrated framework map for QTL analysis in pot azalea (Rhododendron simsii hybrids)

(2010) Ellen De Keyser et al.   BMC MOLECULAR BIOLOGY

Population differentiation of sessile oak at the altitudinal front of migration in the French Pyrenees

(2010) F. ALBERTO et al.   MOLECULAR ECOLOGY

Towards identifying genes underlying ecologically relevant traits in Arabidopsis thaliana

(2010) Joy Bergelson et al.   NATURE REVIEWS GENETICS

In Vitro vs In Silico Detected SNPs for the Development of a Genotyping Array: What Can We Learn from a Non-Model Species?

(2010) Camille Lepoittevin et al.   PLoS One

Syntenic relationships among legumes revealed using a gene-based genetic linkage map of common bean (Phaseolus vulgaris L.)

(2010) Melody McConnell et al.   THEORETICAL AND APPLIED GENETICS

Meta-analysis of QTL involved in silage quality of maize and comparison with the position of candidate genes

(2010) M. Truntzler et al.   THEORETICAL AND APPLIED GENETICS

Palaeogenomics of plants: synteny-based modelling of extinct ancestors

(2010) Michael Abrouk et al.   TRENDS IN PLANT SCIENCE

PineSAP--sequence alignment and SNP identification pipeline

(2009) J. L. Wegrzyn et al.   BIOINFORMATICS

A White Campion (Silene latifolia) floral expressed sequence tag (EST) library: annotation, EST-SSR characterization, transferability, and utility for comparative mapping

(2009) Maria Moccia et al.   BMC GENOMICS

Identification, characterization and utilization of unigene derived microsatellite markers in tea (Camellia sinensis L.)

(2009) Ram Sharma et al.   BMC PLANT BIOLOGY

Contrasting relationships between the diversity of candidate genes and variation of bud burst in natural and segregating populations of European oaks

(2009) J Derory et al.   HEREDITY

Reconstruction of monocotelydoneous proto-chromosomes reveals faster evolution in plants than in animals

(2009) J. Salse et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping

(2008) François L Luro et al.   BMC GENOMICS

A reference integrated map for cultivated grapevine (Vitis vinifera L.) from three crosses, based on 283 SSR and 501 SNP-based markers

(2008) Silvia Vezzulli et al.   THEORETICAL AND APPLIED GENETICS