Short linear motif core and flanking regions modulate retinoblastoma protein binding affinity and specificity

Conservation and divergence of C-terminal domain structure in the retinoblastoma protein family

(2017) Tyler J. Liban et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RB1: a prototype tumor suppressor and an enigma

(2016) Nicholas J. Dyson   GENES & DEVELOPMENT

Structural Conservation and E2F Binding Specificity within the Retinoblastoma Pocket Protein Family

(2016) Tyler J. Liban et al.   JOURNAL OF MOLECULAR BIOLOGY

Evolution of domain–peptide interactions to coadapt specificity and affinity to functional diversity

(2016) Abdellali Kelil et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural and Functional Characterization of the Acidic Region from the RIZ Tumor Suppressor

(2015) Yizhi Sun et al.   BIOCHEMISTRY

Short linear motifs – ex nihilo evolution of protein regulation

(2015) Norman E. Davey et al.   Cell Communication and Signaling

Convergent evolution and mimicry of protein linear motifs in host–pathogen interactions

(2015) Lucía Beatriz Chemes et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Structural mechanisms of DREAM complex assembly and regulation

(2015) Keelan Z. Guiley et al.   GENES & DEVELOPMENT

Serine 220 phosphorylation of the Merkel cell polyomavirus large T antigen crucially supports growth of Merkel cell carcinoma cells

(2015) David Schrama et al.   INTERNATIONAL JOURNAL OF CANCER

ELM 2016—data update and new functionality of the eukaryotic linear motif resource

(2015) Holger Dinkel et al.   NUCLEIC ACIDS RESEARCH

Short Linear Motifs: Ubiquitous and Functionally Diverse Protein Interaction Modules Directing Cell Regulation

(2014) Kim Van Roey et al.   CHEMICAL REVIEWS

A Million Peptide Motifs for the Molecular Biologist

(2014) Peter Tompa et al.   MOLECULAR CELL

Lysine methylation-dependent binding of 53BP1 to the pRb tumor suppressor

(2014) S. M. Carr et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High-Affinity Rb Binding, p53 Inhibition, Subcellular Localization, and Transformation by Wild-Type or Tumor-Derived Shortened Merkel Cell Polyomavirus Large T Antigens

(2013) S. Borchert et al.   JOURNAL OF VIROLOGY

Molecular mechanisms underlying RB protein function

(2013) Frederick A. Dick et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The emerging contribution of sequence context to the specificity of protein interactions mediated by PDZ domains

(2012) Katja Luck et al.   FEBS LETTERS

Elucidation of the binding preferences of peptide recognition modules: SH3 and PDZ domains

(2012) Joan Teyra et al.   FEBS LETTERS

Structures of inactive retinoblastoma protein reveal multiple mechanisms for cell cycle control

(2012) J. R. Burke et al.   GENES & DEVELOPMENT

Distinct Peptide Binding Specificities of Src Homology 3 (SH3) Protein Domains Can Be Determined by Modulation of Local Energetics across the Binding Interface

(2012) Maryna Gorelik et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Evolution of Linear Motifs within the Papillomavirus E7 Oncoprotein

(2012) Lucía B. Chemes et al.   JOURNAL OF MOLECULAR BIOLOGY

Sequence Evolution of the Intrinsically Disordered and Globular Domains of a Model Viral Oncoprotein

(2012) Lucía B. Chemes et al.   PLoS One

A Dynamic View of Domain-Motif Interactions

(2012) Eyal Akiva et al.   PLoS Computational Biology

Ubiquitin-specific protease 4 is inhibited by its ubiquitin-like domain

(2011) Mark P A Luna-Vargas et al.   EMBO REPORTS

Kinetic Recognition of the Retinoblastoma Tumor Suppressor by a Specific Protein Target

(2011) Lucía B. Chemes et al.   JOURNAL OF MOLECULAR BIOLOGY

Attributes of short linear motifs

(2011) Norman E. Davey et al.   Molecular BioSystems

Targeting mechanism of the retinoblastoma tumor suppressor by a prototypical viral oncoprotein

(2010) Lucía B. Chemes et al.   FEBS Journal

Recognition and Specificity Determinants of the Human Cbx Chromodomains

(2010) Lilia Kaustov et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

SH2 Domains Recognize Contextual Peptide Sequence Information to Determine Selectivity

(2010) Bernard A. Liu et al.   MOLECULAR & CELLULAR PROTEOMICS

An overlapping kinase and phosphatase docking site regulates activity of the retinoblastoma protein

(2010) Alexander Hirschi et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

p38 phosphorylates Rb on Ser567 by a novel, cell cycle-independent mechanism that triggers Rb–Hdm2 interaction and apoptosis

(2010) R B Delston et al.   ONCOGENE

How viruses hijack cell regulation

(2010) Norman E. Davey et al.   TRENDS IN BIOCHEMICAL SCIENCES

Diversity and evolution of chromatin proteins encoded by DNA viruses

(2009) Robson F. de Souza et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery

(2009) Norman E. Davey et al.   BIOINFORMATICS

Evidence for the Concerted Evolution between Short Linear Protein Motifs and Their Flanking Regions

(2009) Claudia Chica et al.   PLoS One

RBF1 promotes chromatin condensation through a conserved interaction with the Condensin II protein dCAP-D3

(2008) M. S. Longworth et al.   GENES & DEVELOPMENT

Contextual Specificity in Peptide-Mediated Protein Interactions

(2008) Amelie Stein et al.   PLoS One

Crystal structure of human retinoblastoma binding protein 9

(2008) Sergey M. Vorobiev et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS