Rapid genetic adaptation to a novel environment despite a genome-wide reduction in genetic diversity

Soft Selective Sweeps in Evolutionary Rescue

(2017) Benjamin A. Wilson et al.   GENETICS

Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife

(2017) Jonathan P. Velotta et al.   MOLECULAR ECOLOGY

Screening of duplicated loci reveals hidden divergence patterns in a complex salmonid genome

(2017) Morten T. Limborg et al.   MOLECULAR ECOLOGY

Soft Selective Sweeps in Evolutionary Rescue

(2017) Benjamin A. Wilson et al.   GENETICS

Population genetic structure and ancestry of steelhead/rainbow trout (Oncorhynchus mykiss) at the extreme southern edge of their range in North America

(2016) Alicia Abadía-Cardoso et al.   CONSERVATION GENETICS

Ancestry and adaptive evolution of anadromous, resident, and adfluvial rainbow trout (Oncorhynchus mykiss) in the San Francisco bay area: application of adaptive genomic variation to conservation in a highly impacted landscape

(2016) Maeva Leitwein et al.   Evolutionary Applications

The Atlantic salmon genome provides insights into rediploidization

(2016) Sigbjørn Lien et al.   NATURE

Population ecology of the sea lamprey (Petromyzon marinus) as an invasive species in the Laurentian Great Lakes and an imperiled species in Europe

(2016) Michael J. Hansen et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Whole-genome resequencing uncovers molecular signatures of natural and sexual selection in wild bighorn sheep

(2015) Marty Kardos et al.   MOLECULAR ECOLOGY

A genetic perspective on rapid evolution in cane toads (Rhinella marina)

(2015) Lee A. Rollins et al.   MOLECULAR ECOLOGY

Evolution of stickleback in 50 years on earthquake-uplifted islands

(2015) Emily A. Lescak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms of epithelial wound detection

(2015) Balázs Enyedi et al.   TRENDS IN CELL BIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Evolutionary Origins and Dynamics of Octoploid Strawberry Subgenomes Revealed by Dense Targeted Capture Linkage Maps

(2014) Jacob A. Tennessen et al.   Genome Biology and Evolution

Osmotic surveillance mediates rapid wound closure through nucleotide release

(2014) William J. Gault et al.   JOURNAL OF CELL BIOLOGY

A well-constrained estimate for the timing of the salmonid whole genome duplication reveals major decoupling from species diversification

(2014) D. J. Macqueen et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout

(2014) D. E. Pearse et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

How important is intraspecific genetic admixture to the success of colonising populations?

(2014) Marc Rius et al.   TRENDS IN ECOLOGY & EVOLUTION

Evolutionary rescue in a changing world

(2014) Stephanie M. Carlson et al.   TRENDS IN ECOLOGY & EVOLUTION

Comparative Mapping Between Coho Salmon (Oncorhynchus kisutch) and Three Other Salmonids Suggests a Role for Chromosomal Rearrangements in the Retention of Duplicated Regions Following a Whole Genome Duplication Event

(2014) M. Kodama et al.   G3-Genes Genomes Genetics

Teleost fish models in membrane transport research: the PEPT1(SLC15A1) H+-oligopeptide transporter as a case study

(2013) Alessandro Romano et al.   JOURNAL OF PHYSIOLOGY-LONDON

Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing

(2013) Paul A. Hohenlohe et al.   MOLECULAR ECOLOGY

Relationship between effective population size, inbreeding and adult fitness-related traits in a steelhead (Oncorhynchus mykiss) population released in the wild

(2013) K. A. Naish et al.   MOLECULAR ECOLOGY

Recombination in the threespine stickleback genome-patterns and consequences

(2013) Marius Roesti et al.   MOLECULAR ECOLOGY

The genomic signature of dog domestication reveals adaptation to a starch-rich diet

(2013) Erik Axelsson et al.   NATURE

Genomic rearrangements and the evolution of clusters of locally adaptive loci

(2013) S. Yeaman   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Variation in Natural Populations of Drosophila melanogaster

(2012) C. H. Langley et al.   GENETICS

The genomic landscape of species divergence in Ficedula flycatchers

(2012) Hans Ellegren et al.   NATURE

Individual condition and stream temperature influence early maturation of rainbow and steelhead trout, Oncorhynchus mykiss

(2011) John R. McMillan et al.   ENVIRONMENTAL BIOLOGY OF FISHES

Extent and scale of local adaptation in salmonid fishes: review and meta-analysis

(2011) D J Fraser et al.   HEREDITY

Who are the missing parents? Grandparentage analysis identifies multiple sources of gene flow into a wild population

(2011) MARK R. CHRISTIE et al.   MOLECULAR ECOLOGY

Whole-genome resequencing reveals loci under selection during chicken domestication

(2010) Carl-Johan Rubin et al.   NATURE

Genomic signatures of diet-related shifts during human origins

(2010) C. C. Babbitt et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

A brief history of fish osmoregulation: the central role of the Mt. Desert Island Biological Laboratory

(2010) David H. Evans   Frontiers in Physiology

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

A Comprehensive Linkage Map of the Dog Genome

(2009) A. K. Wong et al.   GENETICS

The involvement of SLC26 anion transporters in chloride uptake in zebrafish (Danio rerio) larvae

(2009) M. Bayaa et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Adaptive evolution in invasive species

(2008) Peter J. Prentis et al.   TRENDS IN PLANT SCIENCE

Founding events in species invasions: genetic variation, adaptive evolution, and the role of multiple introductions

(2007) K. M. DLUGOSCH et al.   MOLECULAR ECOLOGY