Ancestry and adaptive evolution of anadromous, resident, and adfluvial rainbow trout (Oncorhynchus mykiss) in the San Francisco bay area: application of adaptive genomic variation to conservation in a highly impacted landscape

Population genetic structure and ancestry of steelhead/rainbow trout (Oncorhynchus mykiss) at the extreme southern edge of their range in North America

(2016) Alicia Abadía-Cardoso et al.   CONSERVATION GENETICS

Saving the spandrels? Adaptive genomic variation in conservation and fisheries management

(2016) D. E. Pearse   JOURNAL OF FISH BIOLOGY

Quantifying heritable variation in fitness-related traits of wild, farmed and hybrid Atlantic salmon families in a wild river environment

(2015) T E Reed et al.   HEREDITY

Shifting Thresholds: Rapid Evolution of Migratory Life Histories in Steelhead/Rainbow Trout,Oncorhynchus mykiss

(2015) Corey C. Phillis et al.   JOURNAL OF HEREDITY

Ontogenetic changes in embryonic and brain gene expression in progeny produced from migratory and residentOncorhynchus mykiss

(2015) Garrett J. McKinney et al.   MOLECULAR ECOLOGY

Migration-related phenotypic divergence is associated with epigenetic modifications in rainbow trout

(2015) Melinda R. Baerwald et al.   MOLECULAR ECOLOGY

Sex-dependent dominance at a single locus maintains variation in age at maturity in salmon

(2015) Nicola J. Barson et al.   NATURE

Accelerating extinction risk from climate change

(2015) M. C. Urban   SCIENCE

Using genomics to characterize evolutionary potential for conservation of wild populations

(2014) Katherine A. Harrisson et al.   Evolutionary Applications

Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout

(2014) D. E. Pearse et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population Structure of Steelhead in Coastal California

(2014) John Carlos Garza et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

(2014) Camille Berthelot et al.   Nature Communications

The fitness costs of adaptation via phenotypic plasticity and maternal effects

(2013) Thomas H. G. Ezard et al.   FUNCTIONAL ECOLOGY

Large-scale parentage analysis reveals reproductive patterns and heritability of spawn timing in a hatchery population of steelhead (Oncorhynchus mykiss)

(2013) Alicia Abadía-Cardoso et al.   MOLECULAR ECOLOGY

Genetic Architecture of Migration-Related Traits in Rainbow and Steelhead Trout, Oncorhynchus mykis s

(2013) Benjamin C. Hecht et al.   G3-Genes Genomes Genetics

Male-biased sex ratio of nonanadromous Oncorhynchus mykiss in a partially migratory population in California

(2012) David E. Rundio et al.   ECOLOGY OF FRESHWATER FISH

Stocking impacts the expression of candidate genes and physiological condition in introgressed brook charr (Salvelinus fontinalis) populations

(2012) Fabien C. Lamaze et al.   Evolutionary Applications

Conspecifics can be aliens too: A review of effects of restocking practices in vertebrates

(2012) Jocelyn Champagnon et al.   JOURNAL FOR NATURE CONSERVATION

Should I Stay or Should I Go? The Influence of Genetic Origin on Emigration Behavior and Physiology of Resident and Anadromous JuvenileOncorhynchus mykiss

(2012) Sean A. Hayes et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT

Smoltification in an Impounded, Adfluvial Redband Trout Population Upstream from an Impassable Dam: Does It Persist?

(2012) Dean E. Holecek et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Fish and hydropower on the U.S. Atlantic coast: failed fisheries policies from half-way technologies

(2012) J. Jed Brown et al.   Conservation Letters

Weakened portfolio effect in a collapsed salmon population complex

(2011) Stephanie Marie Carlson et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

A conserved haplotype controls parallel adaptation in geographically distant salmonid populations

(2011) MICHAEL R. MILLER et al.   MOLECULAR ECOLOGY

Discovery and characterization of single-nucleotide polymorphisms in steelhead/rainbow trout,Oncorhynchus mykiss

(2011) ALICIA ABADÍA-CARDOSO et al.   Molecular Ecology Resources

A Microsatellite Genome Screen Identifies Chromosomal Regions under Differential Selection in Steelhead and Rainbow Trout

(2011) Andrés Martínez et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

The genetics of migration on the move

(2011) Miriam Liedvogel et al.   TRENDS IN ECOLOGY & EVOLUTION

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Disruption of historical patterns of isolation by distance in coastal steelhead

(2010) Devon E. Pearse et al.   CONSERVATION GENETICS

Temporally stable population-specific differences in run timing of one-sea-winter Atlantic salmon returning to a large river system

(2010) Juha-Pekka Vähä et al.   Evolutionary Applications

Population diversity and the portfolio effect in an exploited species

(2010) Daniel E. Schindler et al.   NATURE

Clock polymorphism in Pacific salmon: evidence for variable selection along a latitudinal gradient

(2010) K. G. O'Malley et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Biodiversity Conservation: Challenges Beyond 2010

(2010) Michael R. W. Rands et al.   SCIENCE

A Widespread Chromosomal Inversion Polymorphism Contributes to a Major Life-History Transition, Local Adaptation, and Reproductive Isolation

(2010) David B. Lowry et al.   PLOS BIOLOGY

Reduced anti-predator responses in multi-generational hybrids of farmed and wild Atlantic salmon (Salmo salar L.)

(2009) Aimee Lee S. Houde et al.   CONSERVATION GENETICS

Over the Falls? Rapid Evolution of Ecotypic Differentiation in Steelhead/Rainbow Trout (Oncorhynchus mykiss)

(2009) Devon E. Pearse et al.   JOURNAL OF HEREDITY

Human predators outpace other agents of trait change in the wild: Fig. 1.

(2009) Chris T. Darimont et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Population genetic structure and ancestry of Oncorhynchus mykiss populations above and below dams in south-central California

(2008) Anthony J. Clemento et al.   CONSERVATION GENETICS

PERSPECTIVE: Potential responses to climate change in organisms with complex life histories: evolution and plasticity in Pacific salmon

(2008) L. G. Crozier et al.   Evolutionary Applications

Linkage disequilibrium — understanding the evolutionary past and mapping the medical future

(2008) Montgomery Slatkin   NATURE REVIEWS GENETICS