Elevated seawater temperature disrupts the microbiome of an ecologically important bioeroding sponge

Evaluating the core microbiota in complex communities: A systematic investigation

(2017) Carmen Astudillo-García et al.   ENVIRONMENTAL MICROBIOLOGY

Integrated metabolism in sponge–microbe symbiosis revealed by genome-centered metatranscriptomics

(2017) Lucas Moitinho-Silva et al.   ISME Journal

The sponge microbiome project

(2017) Lucas Moitinho-Silva et al.   GigaScience

The response of a boreal deep-sea sponge holobiont to acute thermal stress

(2017) R. Strand et al.   Scientific Reports

Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems

(2016) David G. Bourne et al.   Annual Review of Microbiology

A mass bleaching event involving clionaid sponges

(2016) M. Hill et al.   CORAL REEFS

Environmental drivers of microbial community shifts in the giant barrel sponge,Xestospongia muta, over a shallow to mesophotic depth gradient

(2016) Kathleen M. Morrow et al.   ENVIRONMENTAL MICROBIOLOGY

Climate change stressors destabilize the microbiome of the Caribbean barrel sponge, Xestospongia muta

(2016) Michael P. Lesser et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

The Sponge Hologenome

(2016) Nicole S. Webster et al.   mBio

The Microbial Signature Provides Insight into the Mechanistic Basis of Coral Success across Reef Habitats

(2016) Alejandra Hernandez-Agreda et al.   mBio

Diversity, structure and convergent evolution of the global sponge microbiome

(2016) Torsten Thomas et al.   Nature Communications

codyn: Anrpackage of community dynamics metrics

(2016) Lauren M. Hallett et al.   Methods in Ecology and Evolution

Effects of light attenuation on the sponge holobiont- implications for dredging management

(2016) Mari-Carmen Pineda et al.   Scientific Reports

Recovery from bleaching is mediated by threshold densities of background thermo-tolerant symbiont types in a reef-building coral

(2016) Line K. Bay et al.   Royal Society Open Science

The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts

(2015) Tracy D Ainsworth et al.   ISME Journal

Sponge-Specific Unknown Bacterial Groups Detected in Marine Sponges Collected from Korea Through Barcoded Pyrosequencing

(2015) Jong-Bin Jeong et al.   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Coral-the world's most diverse symbiotic ecosystem

(2015) Linda L. Blackall et al.   MOLECULAR ECOLOGY

Lifestyle Evolution in Cyanobacterial Symbionts of Sponges

(2015) Ilia Burgsdorf et al.   mBio

Elimination of sulphur odours at landfills by bioconversion and the corona discharge plasma technique

(2014) Fangfang Xia et al.   ENVIRONMENTAL TECHNOLOGY

Pyrosequencing Reveals the Microbial Communities in the Red Sea Sponge Carteriospongia foliascens and Their Impressive Shifts in Abnormal Tissues

(2014) Zhao-Ming Gao et al.   MICROBIAL ECOLOGY

Eutrophication has no short-term effect on the Cymbastela stipitata holobiont

(2014) Heidi M. Luter et al.   Frontiers in Microbiology

Sensitivity of grassland plant community composition to spatial vs. temporal variation in precipitation

(2013) Elsa E. Cleland et al.   ECOLOGY

Sponge biomass and bioerosion rates increase under ocean warming and acidification

(2013) James K. H. Fang et al.   GLOBAL CHANGE BIOLOGY

Marine microbial symbiosis heats up: the phylogenetic and functional response of a sponge holobiont to thermal stress

(2013) Lu Fan et al.   ISME Journal

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Till Death Do Us Part: Stable Sponge-Bacteria Associations under Thermal and Food Shortage Stresses

(2013) Lucía Pita et al.   PLoS One

Cliona tumula sp. nov., a conspicuous, massive Symbiodinium-bearing clionaid from the lower Florida Keys (USA)(Demospongiae: Hadromerida: Clionaidae)

(2013) SARAH FRIDAY et al.   ZOOTAXA

Boring sponges, an increasing threat for coral reefs affected by bleaching events

(2013) José L. Carballo et al.   Ecology and Evolution

Stability of Sponge-Associated Bacteria over Large Seasonal Shifts in Temperature and Irradiance

(2012) Patrick M. Erwin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Thermal stress responses in the bacterial biosphere of the Great Barrier Reef sponge,Rhopaloeides odorabile

(2012) Rachel Simister et al.   ENVIRONMENTAL MICROBIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Thermal and Sedimentation Stress Are Unlikely Causes of Brown Spot Syndrome in the Coral Reef Sponge, Ianthella basta

(2012) Heidi M. Luter et al.   PLoS One

Emended description of the genus Rhodothalassium Imhoff et al., 1998 and proposal of Rhodothalassiaceae fam. nov. and Rhodothalassiales ord. nov

(2012) V. Venkata Ramana et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms

(2011) Rachel L. Simister et al.   ENVIRONMENTAL MICROBIOLOGY

Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges

(2011) Susanne Schmitt et al.   ISME Journal

Symbiodinium diversity among host clionaid sponges from Caribbean and Pacific reefs: Evidence of heteroplasmy and putative host-specific symbiont lineages

(2011) Malcolm Hill et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The larval sponge holobiont exhibits high thermal tolerance

(2011) Nicole S. Webster et al.   Environmental Microbiology Reports

Ribosomal tag pyrosequencing of DNA and RNA from benthic coral reef microbiota: community spatial structure, rare members and nitrogen-cycling guilds

(2010) Eric Gaidos et al.   ENVIRONMENTAL MICROBIOLOGY

Elevated seawater temperature causes a microbial shift on crustose coralline algae with implications for the recruitment of coral larvae

(2010) Nicole S Webster et al.   ISME Journal

Effects of Sponge Bleaching on Ammonia-Oxidizing Archaea: Distribution and Relative Expression of Ammonia Monooxygenase Genes Associated with the Barrel Sponge Xestospongia muta

(2010) Susanna López-Legentil et al.   MICROBIAL ECOLOGY

Responses of coral-associated bacterial communities to heat stress differ withSymbiodiniumtype on the same coral host

(2010) RAECHEL A. LITTMAN et al.   MOLECULAR ECOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of aerobic and anaerobic ammonia-oxidizing bacteria in marine sponges

(2009) Naglaa M Mohamed et al.   ISME Journal

Diversity and abundance of photosynthetic sponges in temperate Western Australia

(2009) Marie-Louise Lemloh et al.   BMC ECOLOGY

Temperature thresholds for bacterial symbiosis with a sponge

(2008) Nicole S Webster et al.   ISME Journal

Photosynthetic symbioses in animals

(2008) A.A. Venn et al.   JOURNAL OF EXPERIMENTAL BOTANY

Sponge and coral zooxanthellae in heat and light: preliminary results of photochemical efficiency monitored with pulse amplitude modulated fluorometry

(2008) Christine H. L. Schönberg et al.   Marine Ecology-An Evolutionary Perspective

Bleaching and stress in coral reef ecosystems:hsp70expression by the giant barrel spongeXestospongia muta

(2008) SUSANNA LÓPEZ-LEGENTIL et al.   MOLECULAR ECOLOGY

Phylogenetic relationships among zooxanthellae (Symbiodinium) associated to excavating sponges (Cliona spp.) reveal an unexpected lineage in the Caribbean

(2008) C. Granados et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Metabolic interactions between algal symbionts and invertebrate hosts

(2008) DAVID YELLOWLEES et al.   PLANT CELL AND ENVIRONMENT