4.7 Article

Targeting Multiple Effector Pathways in Pancreatic Ductal Adenocarcinoma with a G-Quadruplex-Binding Small Molecule

Journal

JOURNAL OF MEDICINAL CHEMISTRY
Volume 61, Issue 6, Pages 2500-2517

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/acs.jmedchem.7b01781

Keywords

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Funding

  1. Pancreatic Cancer Research Fund
  2. Medical Research Council
  3. Wellcome Trust
  4. Johnson Johnson
  5. UCL Technology Fund
  6. University of Cambridge
  7. Cancer Research UK
  8. Cancer Research UK [C14303/A17197]
  9. Cancer Research UK Glasgow Centre
  10. BSU facilities at the Cancer Research UK Beatson Institute [C596/A18076, C596/A17196]
  11. MRC [MC_PC_12024, G1001497] Funding Source: UKRI

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Human pancreatic ductal adenocarcinoma (PDAC) involves the dysregulation of multiple signaling pathways. A novel approach to the treatment of PDAC is described, involving the targeting of cancer genes in PDAC pathways having over-representation of Gquadruplexes, using the trisubstituted naphthalene diimide quadruplexbinding compound 2,7-bis(3-morpholinopropyl)-4-((2-(pyrrolidin-1-yl)ethyl)amino)benzo [lmn] [3,8] phenanthroline-1,3,6,8 (2H,7H)-tetraone (CM03). This compound has been designed by computer modeling, is a potent inhibitor of cell growth in PDAC cell lines, and has anticancer activity in PDAC models, with a superior profile compared to gemcitabine, a commonly used therapy. Whole-transcriptome RNA-seq methodology has been used to analyze the effects of this quadruplexbinding small molecule on global gene expression. This has revealed the down-regulation of a large number of genes, rich in putative quadruplex elements and involved in essential pathways of PDAC survival, metastasis, and drug resistance. The changes produced by CM03 represent a global response to the complexity of human PDAC and may be applicable to other currently hard-to-treat cancers.

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