4.5 Article

Investigation of antioxidant ability of grape seeds extract to prevent oxidatively induced DNA damage by gas chromatography-tandem mass spectrometry

Publisher

ELSEVIER SCIENCE BV
DOI: 10.1016/j.jchromb.2017.11.044

Keywords

DNA oxidation; Grape seed; Catechin; Cyanidin; Antioxidant; GC-MS/MS

Funding

  1. Uludag University Research Foundation [2013/13]

Ask authors/readers for more resources

Phenolic compounds have been studied elaborately for their efficacy to improve health and to protect against a wide variety of diseases. Herein this study, different analysis methods were implemented to evaluate the antioxidant properties of catechin and cyanidin using their standard substances and as they found in the grape seeds extracts. Total phenol contents were 107.39 +/- 8.94 mg GAE/g dw of grape seeds for grape seed extract (GSE) and 218.32 +/- 10.66 mg GAE/g dw of grape seeds for acid-hydrolyzed grape seed extract (AcGSE). The extracts were analyzed by HPLC-DAD system and the results showed the presence of catechin, gallic acid, chlorogenic acid and ellagic acid in the processed methanolic extract and cyanidin, gallic acid and ellagic acid in the processed acidified methanolic extract. The protective abilities of catechin and cyanidin were tested against the oxidation of DNA. The results showed that cyanidin has better protection of DNA against oxidation than catechin. GSE and AcGSE were revealed to inhibit the oxidatively induced DNA damage. GSE decreased about 57% of damage caused by the Fenton control sample. This study could show new aspects of the antioxidant profiles of cyanidin and catechin.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.5
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Biotechnology & Applied Microbiology

Quantification of DNA damage products by gas chromatography tandem mass spectrometry in lung cell lines and prevention effect of thyme antioxidants on oxidative induced DNA damage

Onder Aybastier, Sam Dawbaa, Cevdet Demir, Oguzhan Akgun, Engin Ulukaya, Ferda Ari

MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2018)

Article Chemistry, Physical

Design and synthesis of new 4-methylthiazole derivatives: In vitro and in silico studies of antimicrobial activity

Asaf Evrim Evren, Sam Dawbaa, Demokrat Nuha, Sule Aybuke Yavuz, Ulkuye Dudu Gul, Leyla Yurttas

Summary: The study focuses on the development of new antimicrobial agents, designed and synthesized new compounds, and elucidated their structures using various techniques. The research found valuable antibacterial effects of the compounds, and the structure-activity relationship study provided guidance for the discovery of new antimicrobials.

JOURNAL OF MOLECULAR STRUCTURE (2021)

Article Chemistry, Analytical

Optimization and validation of ultrasensitive GC-MS/MS method to measure oxidatively induced DNA damage products and role of antioxidants in oxidation mechanism

Onder Aybastier, Cevdet Demir

Summary: The study focused on the oxidation of DNA due to exposure to reactive oxygen species (ROS) and its role in various diseases, including cancer and neurodegenerative diseases. A GC-MS/MS method was developed for ultrasensitive detection of individual DNA damage products, and multiple response surface methodology (MRSM) was used to optimize the derivatization conditions. The presence of antioxidants resulted in a significant decrease in DNA base damage products, as shown by the study.

JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS (2021)

Article Chemistry, Inorganic & Nuclear

Synthesis of new thiazole derivatives and evaluation of their antimicrobial and cytotoxic activities

Sam Dawbaa, Asaf Evrim Evren, Zerrin Canturk, Leyla Yurttas

Summary: Novel 2-heteroaryl-N-[4-(substituted aryl)thiazol-2-yl]propanamide derivatives were synthesized and tested for antimicrobial activity, with compounds 7e and 7f showing the highest antibacterial activity. Some derivatives displayed cytotoxic activity against human leukemia cells and monocytic leukemia cells.

PHOSPHORUS SULFUR AND SILICON AND THE RELATED ELEMENTS (2021)

Article Chemistry, Medicinal

Synthesis of novel thiazolyl hydrazone derivatives as potent dual monoamine oxidase-aromatase inhibitors

Asaf Evrim Evren, Demokrat Nuha, Sam Dawbaa, Begum Nurpelin Saglik, Leyla Yurttas

Summary: In this study, a new series of 2-thiazolyl hydrazone derivatives were synthesized and evaluated for their inhibitory effects on monoamine oxidase enzymes. Significant results were obtained, with several compounds showing potent and selective inhibition. Molecular docking, molecular dynamics simulations, and QSAR studies were performed to explore the structure-activity relationship. This study represents the first investigation of dual inhibitors on both MAO and aromatase enzymes.

EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY (2022)

Article Multidisciplinary Sciences

Design and synthesis of novel enantiopure Bis(5-Isoxazolidine) derivatives: insights into their antioxidant and antimicrobial potential via in silico drug-likeness, pharmacokinetic, medicinal chemistry properties, and molecular docking studies

Arwa AL-Adhreai, Mohammed ALSaeedy, Ali Alrabie, Inas Al-Qadsy, Sam Dawbaa, ZabnAllah M. Alaizeri, Hisham A. Alhadlaq, Abdulrahman Al-Kubati, Maqusood Ahamed, Mazahar Farooqui

Summary: A new series of isoxazolidine compounds were designed, synthesized and characterized for their antimicrobial and antioxidant properties. The compounds showed significant activity against various bacterial species and fungi, with some compounds also exhibiting high antioxidant effects. Molecular docking studies indicated that the synthesized compounds had a better binding mode to the target protein compared to the standard drug.

HELIYON (2022)

Article Chemistry, Medicinal

Biological activity evaluation of novel monoamine oxidase inhibitory compounds targeting Parkinson disease

Sam Dawbaa, Asaf Evrim Evren, Begum Nurpelin Saglik, Nalan Gundogdu-Karaburun, Ahmet Cagri Karaburun

Summary: In this study, a series of hybrid molecules were designed as potential selective monoamine oxidase inhibitors for the treatment of Parkinson's disease. In vitro experiments showed that compounds 3a, 3c, and 3e demonstrated inhibitory activity against both MAO-A and MAO-B, with compound 3c exhibiting the most promising inhibition. Molecular dynamics simulation indicated that the stability of the complex formed between compound 3c and MAO-A was poor.

FUTURE MEDICINAL CHEMISTRY (2022)

Article Chemistry, Physical

New oxadiazole/triazole derivatives with antimicrobial and antioxidant properties

Sam Dawbaa, Demokrat Nuha, Asaf Evrim Evren, Meral Yilmaz Cankilic, Leyla Yurtta, Gulhan Turan

Summary: We synthesized a series of oxadiazole and triazole derivatives and tested their antimicrobial and antioxidant activity. The compounds were analyzed through NMR and HRMS, and their pharmacokinetic profile was predicted through in silico calculations. However, none of the compounds showed significant antibacterial or antifungal activity compared to reference agents. Some compounds exhibited antioxidant potency, but not equivalent to ascorbic acid. Molecular docking and molecular dynamics simulation studies were conducted to analyze the compounds' binding modes and mechanism of enzyme interaction.

JOURNAL OF MOLECULAR STRUCTURE (2023)

Article Biochemistry & Molecular Biology

Novel oxadiazole-thiadiazole derivatives: synthesis, biological evaluation, and in silico studies

Asaf Evrim Evren, Demokrat Nuha, Sam Dawbaa, Abdullah Burak Karaduman, Beguem Nurpelin Saglik, Leyla Yurttas

Summary: A new series of thiazole derivatives were synthesized and compounds 5a, 5b, and 5c showed promising anticancer activity against MCF7 cells, but not against A549 cells or L929 healthy cells. The acetamide moiety was found to play a pivotal role in the anticancer activity. Molecular docking and dynamics simulation studies revealed the binding modes and stability of the active compounds with the enzyme. The distance between the H-bond rich zone of the ligand and the heteroaryl ring system of the ligand was found to significantly impact the aromatase inhibitory activity.

JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS (2023)

No Data Available