Memory-induced acceleration and slowdown of barrier crossing

Reaction Coordinates and Mechanistic Hypothesis Tests

(2016) Baron Peters   Annual Review of Physical Chemistry

Solvent exchange in liquid methanol and rate theory

(2016) Liem X. Dang et al.   CHEMICAL PHYSICS LETTERS

Kramers’ Turnover Theory: Improvement and Extension to Low Barriers

(2016) Eli Pollak et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Protein folding trajectories can be described quantitatively by one-dimensional diffusion over measured energy landscapes

(2016) Krishna Neupane et al.   Nature Physics

A study of Kramers’ turnover theory in the presence of exponential memory friction

(2015) Reuven Ianconescu et al.   JOURNAL OF CHEMICAL PHYSICS

Incorporation of memory effects in coarse-grained modeling via the Mori-Zwanzig formalism

(2015) Zhen Li et al.   JOURNAL OF CHEMICAL PHYSICS

Reduction of All-Atom Protein Folding Dynamics to One-Dimensional Diffusion

(2015) Wenwei Zheng et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Testing Landscape Theory for Biomolecular Processes with Single Molecule Fluorescence Spectroscopy

(2015) Katherine Truex et al.   PHYSICAL REVIEW LETTERS

Structural origin of slow diffusion in protein folding

(2015) H. S. Chung et al.   SCIENCE

Finite barrier corrections to the PGH solution of Kramers' turnover theory

(2014) Eli Pollak et al.   JOURNAL OF CHEMICAL PHYSICS

Transmission Coefficients, Committors, and Solvent Coordinates in Ion-Pair Dissociation

(2014) Ryan Gotchy Mullen et al.   Journal of Chemical Theory and Computation

Understanding the Rates and Molecular Mechanism of Water-Exchange around Aqueous Ions Using Molecular Simulations

(2014) Harsha V. R. Annapureddy et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Molecular origins of internal friction effects on protein-folding rates

(2014) David de Sancho et al.   Nature Communications

Generating transition paths by Langevin bridges

(2011) Henri Orland   JOURNAL OF CHEMICAL PHYSICS

Determination of reaction coordinates via locally scaled diffusion map

(2011) Mary A. Rohrdanz et al.   JOURNAL OF CHEMICAL PHYSICS

Locating the Barrier for Folding of Single Molecules under an External Force

(2011) Olga K. Dudko et al.   PHYSICAL REVIEW LETTERS