Disentangling genetic structure for genetic monitoring of complex populations

Genetics and the conservation of natural populations: allozymes to genomes

(2017) Fred W. Allendorf   MOLECULAR ECOLOGY

Coalescent inferences in conservation genetics: should the exception become the rule?

(2016) Valeria Montano   Biology Letters

The problem of estimating recent genetic connectivity in a changing world

(2016) Pasan Samarasin et al.   CONSERVATION BIOLOGY

Genomics advances the study of inbreeding depression in the wild

(2016) Marty Kardos et al.   Evolutionary Applications

Genetic factors in threatened species recovery plans on three continents

(2016) Jennifer C Pierson et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Demographic inference under a spatially continuous coalescent model

(2016) T A Joseph et al.   HEREDITY

Population genetics from 1966 to 2016

(2016) B Charlesworth et al.   HEREDITY

Demographic inference under the coalescent in a spatial continuum

(2016) Stéphane Guindon et al.   THEORETICAL POPULATION BIOLOGY

Genomics in Conservation: Case Studies and Bridging the Gap between Data and Application

(2016) Brittany A. Garner et al.   TRENDS IN ECOLOGY & EVOLUTION

Efficient Coalescent Simulation and Genealogical Analysis for Large Sample Sizes

(2016) Jerome Kelleher et al.   PLoS Computational Biology

The spatial Lambda-Fleming–Viot process: An event-based construction and a lookdown representation

(2015) A. Véber et al.   ANNALES DE L INSTITUT HENRI POINCARE-PROBABILITES ET STATISTIQUES

Estimating phylogenetic trees from genome-scale data

(2015) Liang Liu et al.   Annals of the New York Academy of Sciences

Population Graphs and Landscape Genetics

(2015) Rodney J. Dyer   Annual Review of Ecology Evolution and Systematics

On the importance of being structured: instantaneous coalescence rates and human evolution—lessons for ancestral population size inference?

(2015) O Mazet et al.   HEREDITY

POPS: A Software for Prediction of Population Genetic Structure Using Latent Regression Models

(2015) Flora Jay et al.   Journal of Statistical Software

Decades of population genetic research reveal the need for harmonization of molecular markers: the grey wolfCanis lupusas a case study

(2015) G. Arjen de Groot et al.   MAMMAL REVIEW

Is there such a thing as landscape genetics?

(2015) Rodney J. Dyer   MOLECULAR ECOLOGY

Discordant patterns of genetic and phenotypic differentiation in five grasshopper species codistributed across a microreserve network

(2015) Joaquín Ortego et al.   MOLECULAR ECOLOGY

Transatlantic secondary contact in Atlantic Salmon, comparing microsatellites, a single nucleotide polymorphism array and restriction-site associated DNA sequencing for the resolution of complex spatial structure

(2015) Ian R. Bradbury et al.   MOLECULAR ECOLOGY

Demographic inference using genetic data from a single individual: Separating population size variation from population structure

(2015) Olivier Mazet et al.   THEORETICAL POPULATION BIOLOGY

Ocean's eleven: a critical evaluation of the role of population, evolutionary and molecular genetics in the management of wild fisheries

(2015) Jennifer R Ovenden et al.   FISH AND FISHERIES

Assessing multi-taxa sensitivity to the human footprint, habitat fragmentation and loss by exploring alternative scenarios of dispersal ability and population size: a simulation approach

(2014) Brian K. Hand et al.   BIODIVERSITY AND CONSERVATION

A multi-method approach for analyzing hierarchical genetic structures: a case study with cougarsPuma concolor

(2014) Niko Balkenhol et al.   ECOGRAPHY

Maximum-Likelihood Inference of Population Size Contractions from Microsatellite Data

(2014) Raphaël Leblois et al.   MOLECULAR BIOLOGY AND EVOLUTION

Contribution of genetics to ecological restoration

(2014) Jose Luis Mijangos et al.   MOLECULAR ECOLOGY

Coalescence 2.0: a multiple branching of recent theoretical developments and their applications

(2014) Aurélien Tellier et al.   MOLECULAR ECOLOGY

Performance of partial statistics in individual-based landscape genetics

(2014) E. M. Kierepka et al.   Molecular Ecology Resources

Coalescent simulation in continuous space: Algorithms for large neighbourhood size

(2014) J. Kelleher et al.   THEORETICAL POPULATION BIOLOGY

The relative influence of habitat amount and configuration on genetic structure across multiple spatial scales

(2014) Katie L. Millette et al.   Ecology and Evolution

Large scale behaviour of the spatial $\varLambda$-Fleming–Viot process

(2013) N. Berestycki et al.   ANNALES DE L INSTITUT HENRI POINCARE-PROBABILITES ET STATISTIQUES

Coalescent simulation in continuous space

(2013) Jerome Kelleher et al.   BIOINFORMATICS

NONSTATIONARY PATTERNS OF ISOLATION-BY-DISTANCE: INFERRING MEASURES OF LOCAL GENETIC DIFFERENTIATION WITH BAYESIAN KRIGING

(2013) Nicolas Duforet-Frebourg et al.   EVOLUTION

Estimation of effective population size in continuously distributed populations: there goes the neighborhood

(2013) M C Neel et al.   HEREDITY

Modelling evolution in a spatial continuum

(2013) N H Barton et al.   JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT

Finding the functional grain: comparing methods for scaling resistance surfaces

(2013) Paul Galpern et al.   LANDSCAPE ECOLOGY

Current approaches using genetic distances produce poor estimates of landscape resistance to interindividual dispersal

(2013) Tabitha A. Graves et al.   MOLECULAR ECOLOGY

Coalescent-Based Genome Analyses Resolve the Early Branches of the Euarchontoglires

(2013) Vikas Kumar et al.   PLoS One

The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods

(2013) Michael W. Lloyd et al.   PLoS One

Combining genetic and demographic data for prioritizing conservation actions: insights from a threatened fish species

(2013) Ivan Paz-Vinas et al.   Ecology and Evolution

The spatial $\Lambda$-Fleming–Viot process on a large torus: Genealogies in the presence of recombination

(2012) A. M. Etheridge et al.   ANNALS OF APPLIED PROBABILITY

Sample design effects in landscape genetics

(2012) Sara J. Oyler-McCance et al.   CONSERVATION GENETICS

A New Model for Evolution in a Spatial Continuum

(2012) Nick Barton et al.   ELECTRONIC JOURNAL OF PROBABILITY

Genome-scale coestimation of species and gene trees

(2012) B. Boussau et al.   GENOME RESEARCH

Population size and major valleys explain microsatellite variation better than taxonomic units for caribou in western Canada

(2012) ROBERT SERROUYA et al.   MOLECULAR ECOLOGY

Reliability of genetic bottleneck tests for detecting recent population declines

(2012) M. ZACHARIAH PEERY et al.   MOLECULAR ECOLOGY

Genetic monitoring in natural perennial plant populations

(2011) F. A. Aravanopoulos   Botany

Incorporating evolutionary principles into environmental management and policy

(2011) Richard Lankau et al.   Evolutionary Applications

Genetic structure in a dynamic baboon hybrid zone corroborates behavioural observations in a hybrid population

(2011) M. J. E. CHARPENTIER et al.   MOLECULAR ECOLOGY

Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models

(2010) Mukul S Bansal et al.   BMC BIOINFORMATICS

Applications of landscape genetics in conservation biology: concepts and challenges

(2010) Gernot Segelbacher et al.   CONSERVATION GENETICS

Unified Framework to Evaluate Panmixia and Migration Direction Among Multiple Sampling Locations

(2010) P. Beerli et al.   GENETICS

Spatial scaling and multi-model inference in landscape genetics: Martes americana in northern Idaho

(2010) Tzeidle N. Wasserman et al.   LANDSCAPE ECOLOGY

Scale dependent inference in landscape genetics

(2010) Samuel A. Cushman et al.   LANDSCAPE ECOLOGY

Landscape genetics: where are we now?

(2010) ANDREW STORFER et al.   MOLECULAR ECOLOGY

When are genetic methods useful for estimating contemporary abundance and detecting population trends?

(2010) DAVID A. TALLMON et al.   Molecular Ecology Resources

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

Importance and future of individual markers for the ecosystem approach to fisheries

(2009) Jean-Marc Fromentin et al.   AQUATIC LIVING RESOURCES

Neglect of Genetic Diversity in Implementation of the Convention on Biological Diversity

(2009) LINDA LAIKRE et al.   CONSERVATION BIOLOGY

Measuring evolutionary responses to global warming: cautionary lessons fromDrosophila

(2009) FRANCISCO RODRÍGUEZ-TRELLES et al.   Insect Conservation and Diversity

Using spatial Bayesian methods to determine the genetic structure of a continuously distributed population: clusters or isolation by distance?

(2009) A. C. Frantz et al.   JOURNAL OF APPLIED ECOLOGY

Applied Conservation Genetics and the Need for Quality Control and Reporting of Genetic Data Used in Fisheries and Wildlife Management

(2009) P. A. Morin et al.   JOURNAL OF HEREDITY

Landscape Genetics

(2008) Rolf Holderegger et al.   BIOSCIENCE

Why sampling scheme matters: the effect of sampling scheme on landscape genetic results

(2008) Michael K. Schwartz et al.   CONSERVATION GENETICS

Integrating genetic data into management of marine resources: how can we do it better?

(2008) Robin S Waples et al.   FISH AND FISHERIES

Detecting genetic responses to environmental change

(2008) Ary A. Hoffmann et al.   NATURE REVIEWS GENETICS

Number of Alleles as a Predictor of the Relative Assignment Accuracy of Short Tandem Repeat (STR) and Single-Nucleotide-Polymorphism (SNP) Baselines for Chum Salmon

(2008) Christian T. Smith et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Genetic effects of harvest on wild animal populations

(2008) F ALLENDORF et al.   TRENDS IN ECOLOGY & EVOLUTION

Coalescent genealogy samplers: windows into population history

(2008) Mary K. Kuhner   TRENDS IN ECOLOGY & EVOLUTION