Genome-wide identification of auxin response factor (ARF) genes and its tissue-specific prominent expression in Gossypium raimondii

Small RNA sequencing identifies miRNA roles in ovule and fibre development

(2015) Fuliang Xie et al.   PLANT BIOTECHNOLOGY JOURNAL

Differentiated expression of microRNAs may regulate genotype-dependent traits in cotton

(2014) Runrun Sun et al.   GENE

Genome Duplication and Gene Loss Affect the Evolution of Heat Shock Transcription Factor Genes in Legumes

(2014) Yongxiang Lin et al.   PLoS One

Genome-wide identification and expression analysis of TCP transcription factors in Gossypium raimondii

(2014) Jun Ma et al.   Scientific Reports

Building Phylogenetic Trees from Molecular Data with MEGA

(2013) B. G. Hall   MOLECULAR BIOLOGY AND EVOLUTION

Evolution of the ARF Gene Family in Land Plants: Old Domains, New Tricks

(2012) Cédric Finet et al.   MOLECULAR BIOLOGY AND EVOLUTION

Auxin response factor gene family in Brassica rapa: genomic organization, divergence, expression, and evolution

(2012) Jeong-Hwan Mun et al.   MOLECULAR GENETICS AND GENOMICS

The draft genome of a diploid cotton Gossypium raimondii

(2012) Kunbo Wang et al.   NATURE GENETICS

Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

(2011) Hongyan Xing et al.   BMC GENOMICS

Diversification, phylogeny and evolution of auxin response factor (ARF) family: insights gained from analyzing maize ARF genes

(2011) Yijun Wang et al.   MOLECULAR BIOLOGY REPORTS

Genome-wide analysis of auxin response factor (ARF) gene family from tomato and analysis of their role in flower and fruit development

(2011) Rahul Kumar et al.   MOLECULAR GENETICS AND GENOMICS

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum

(2011) Jian Wu et al.   PLANT CELL REPORTS

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

A draft physical map of a D-genome cotton species (Gossypium raimondii)

(2010) Lifeng Lin et al.   BMC GENOMICS

Auxin-related gene families in abiotic stress response in Sorghum bicolor

(2010) SuiKang Wang et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Functional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.)

(2010) ChenJia Shen et al.   JOURNAL OF EXPERIMENTAL BOTANY

Auxin response factor 2 (ARF2) plays a major role in regulating auxin-mediated leaf longevity

(2010) P. O. Lim et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Transcript profiling reveals diverse roles of auxin-responsive genes during reproductive development and abiotic stress in rice

(2009) Mukesh Jain et al.   FEBS Journal

Expression of MicroRNAs in Cotton

(2009) Baohong Zhang et al.   MOLECULAR BIOTECHNOLOGY

Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)

(2009) Mingxiong Pang et al.   GENOME BIOLOGY

MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences

(2008) S. Kumar et al.   BRIEFINGS IN BIOINFORMATICS

Importance of Lineage-Specific Expansion of Plant Tandem Duplicates in the Adaptive Response to Environmental Stimuli

(2008) K. Hanada et al.   PLANT PHYSIOLOGY

Comprehensive expression profiling analysis of OsIAA gene family in developmental processes and in response to phytohormone and stress treatments

(2008) Yaling Song et al.   PLANTA