Ecological genomics predicts climate vulnerability in an endangered southwestern songbird

Genomic signals of selection predict climate-driven population declines in a migratory bird

(2018) Rachael A. Bay et al.   SCIENCE

Minimum sample sizes for population genomics: an empirical study from an Amazonian plant species

(2017) Alison G. Nazareno et al.   Molecular Ecology Resources

Mapping evaporative water loss in desert passerines reveals an expanding threat of lethal dehydration

(2017) Thomas P. Albright et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Estimating economic damage from climate change in the United States

(2017) Solomon Hsiang et al.   SCIENCE

Available data support protection of the Southwestern Willow Flycatcher under the Endangered Species Act

(2016) Tad C. Theimer et al.   CONDOR

Consistent response of bird populations to climate change on two continents

(2016) P. A. Stephens et al.   SCIENCE

Usefulness of Species Traits in Predicting Range Shifts

(2016) Alba Estrada et al.   TRENDS IN ECOLOGY & EVOLUTION

Adding energy gradients and long-distance dispersal to a neutral model improves predictions of Madagascan bird diversity

(2016) Falko T. Buschke et al.   Ecology and Evolution

Climate-Related Local Extinctions Are Already Widespread among Plant and Animal Species

(2016) John J. Wiens   PLOS BIOLOGY

NxTrim: optimized trimming of Illumina mate pair reads: Table 1.

(2015) Jared O’Connell et al.   BIOINFORMATICS

Genetics, morphology, and ecological niche modeling do not support the subspecies status of the endangered Southwestern Willow Flycatcher (Empidonax traillii extimus)

(2015) Robert M. Zink   CONDOR

RAD Capture (Rapture): Flexible and Efficient Sequence-Based Genotyping

(2015) O. A. Ali et al.   GENETICS

Accelerating extinction risk from climate change

(2015) M. C. Urban   SCIENCE

Assessing species vulnerability to climate change

(2015) Michela Pacifici et al.   Nature Climate Change

Implications of Climate Change for Bird Conservation in the Southwestern U.S. under Three Alternative Futures

(2015) Megan M. Friggens et al.   PLoS One

Ecological genomics meets community-level modelling of biodiversity: mapping the genomic landscape of current and future environmental adaptation

(2014) Matthew C. Fitzpatrick et al.   ECOLOGY LETTERS

Global, 30-m resolution continuous fields of tree cover: Landsat-based rescaling of MODIS vegetation continuous fields with lidar-based estimates of error

(2013) Joseph O. Sexton et al.   International Journal of Digital Earth

Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models

(2013) Eric Frichot et al.   MOLECULAR BIOLOGY AND EVOLUTION

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Ecological genomics of local adaptation

(2013) Outi Savolainen et al.   NATURE REVIEWS GENETICS

Quantifying the benefit of early climate change mitigation in avoiding biodiversity loss

(2013) R. Warren et al.   Nature Climate Change

REAPR: a universal tool for genome assembly evaluation

(2013) Martin Hunt et al.   GENOME BIOLOGY

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Gradient forests: calculating importance gradients on physical predictors

(2011) Nick Ellis et al.   ECOLOGY

Beyond Predictions: Biodiversity Conservation in a Changing Climate

(2011) T. P. Dawson et al.   SCIENCE

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Erosion of Lizard Diversity by Climate Change and Altered Thermal Niches

(2010) B. Sinervo et al.   SCIENCE

The velocity of climate change

(2009) Scott R. Loarie et al.   NATURE

Genome-wide association studies for complex traits: consensus, uncertainty and challenges

(2008) Mark I. McCarthy et al.   NATURE REVIEWS GENETICS

Towards an Integrated Framework for Assessing the Vulnerability of Species to Climate Change

(2008) Stephen E Williams et al.   PLOS BIOLOGY