De novo characterization of the liver transcriptome of javelin goby Synechogobius hasta and analysis of its transcriptomic profile following waterborne copper exposure

Endoplasmic reticulum stress and disturbed calcium homeostasis are involved in copper-induced alteration in hepatic lipid metabolism in yellow catfish Pelteobagrus fulvidraco

(2016) Yu-Feng Song et al.   CHEMOSPHERE

Differential effects of dietary copper deficiency and excess on lipid metabolism in yellow catfish Pelteobagrus fulvidraco

(2015) Qi-Liang Chen et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Hepatic inflammation and fibrosis: Functional links and key pathways

(2015) Ekihiro Seki et al.   HEPATOLOGY

Time-dependent effects of waterborne copper exposure influencing hepatic lipid deposition and metabolism in javelin goby Synechogobius hasta and their mechanism

(2014) Chao Huang et al.   AQUATIC TOXICOLOGY

Effects of copper exposure on the energy metabolism in juveniles of the marine clam Mesodesma mactroides

(2014) Marina Giacomin et al.   AQUATIC TOXICOLOGY

De Novo Characterization of the Spleen Transcriptome of the Large Yellow Croaker (Pseudosciaena crocea) and Analysis of the Immune Relevant Genes and Pathways Involved in the Antiviral Response

(2014) Yinnan Mu et al.   PLoS One

High-throughput sequencing and pathway analysis reveal alteration of the pituitary transcriptome by 17α-ethynylestradiol (EE2) in female coho salmon, Oncorhynchus kisutch

(2013) Louisa B. Harding et al.   AQUATIC TOXICOLOGY

Insights into food preference in hybrid F1 of Siniperca chuatsi (♀) × Siniperca scherzeri (♂) mandarin fish through transcriptome analysis

(2013) Shan He et al.   BMC GENOMICS

Trascriptome analysis of the Pacific white shrimp Litopenaeus vannamei exposed to nitrite by RNA-seq

(2013) Hui Guo et al.   FISH & SHELLFISH IMMUNOLOGY

Transcriptome profiling and digital gene expression analysis of Nile tilapia (Oreochromis niloticus) infected by Streptococcus agalactiae

(2013) Rui Zhang et al.   MOLECULAR BIOLOGY REPORTS

Copper-induced alterations in rat brain depends on route of overload and basal copper levels

(2013) Nathalie Arnal et al.   NUTRITION

De Novo Assembly of Mud Loach (Misgurnus anguillicaudatus) Skin Transcriptome to Identify Putative Genes Involved in Immunity and Epidermal Mucus Secretion

(2013) Yong Long et al.   PLoS One

De novo Assembly of the Indo-Pacific Humpback Dolphin Leucocyte Transcriptome to Identify Putative Genes Involved in the Aquatic Adaptation and Immune Response

(2013) Duan Gui et al.   PLoS One

Deep sequencing-based transcriptome profiling analysis of Oryzias melastigma exposed to PFOS

(2012) Qiansheng Huang et al.   AQUATIC TOXICOLOGY

Effects of Waterborne Chronic Copper Exposure on Hepatic Lipid Metabolism and Metal-Element Composition in Synechogobius hasta

(2012) Qi-Liang Chen et al.   ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY

Tissue-Specific Copper Concentrations in Red Drum after Long-Term Exposure to Sublethal Levels of Waterborne Copper and a 21-Day Withdrawal

(2012) Christopher B. Robinson et al.   NORTH AMERICAN JOURNAL OF AQUACULTURE

Effects of chronic metal exposure on wild fish populations revealed by high-throughput cDNA sequencing

(2011) Fabien Pierron et al.   ECOTOXICOLOGY

Protective effects of calcium on copper toxicity in Pelteobagrus fulvidraco: Copper accumulation, enzymatic activities, histology

(2011) Q.-L. Chen et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Pathological roles of MAPK signaling pathways in human diseases

(2010) Eun Kyung Kim et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Ameliorative Effects of Mulberry (Morus albaL.) Leaves on Hyperlipidemia in Rats Fed a High-Fat Diet: Induction of Fatty Acid Oxidation, Inhibition of Lipogenesis, and Suppression of Oxidative Stress

(2010) Yukihiro KOBAYASHI et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Effect of waterborne copper exposure on growth, hepatic enzymatic activities and histology in Synechogobius hasta

(2010) X.J. Liu et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Gene Expression Alterations in Immune System Pathways in the Thymus after Exposure to Immunosuppressive Chemicals

(2010) Rachel Frawley et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

Applications of next generation sequencing in molecular ecology of non-model organisms

(2010) R Ekblom et al.   HEREDITY

Carnitine palmitoyltransferase 1A (CPT1A) P479L prevalence in live newborns in Yukon, Northwest Territories, and Nunavut

(2010) Sorcha A. Collins et al.   MOLECULAR GENETICS AND METABOLISM

Chemokine receptors intracellular trafficking

(2010) Elena M. Borroni et al.   PHARMACOLOGY & THERAPEUTICS

Identifying Health Impacts of Exposure to Copper Using Transcriptomics and Metabolomics in a Fish Model

(2009) Eduarda M. Santos et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Copper Activation of NF-κB Signaling in HepG2 Cells

(2009) Matthew K. McElwee et al.   JOURNAL OF MOLECULAR BIOLOGY

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Mechanism of Copper-Activated Transcription: Activation of AP-1, and the JNK/SAPK and p38 Signal Transduction Pathways

(2008) Michael D. Mattie et al.   JOURNAL OF MOLECULAR BIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH