Anchored phylogenomics illuminates the skipper butterfly tree of life
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Title
Anchored phylogenomics illuminates the skipper butterfly tree of life
Authors
Keywords
Anchored hybrid enrichment, Butterfly phylogenomics, Coalescent multi-species, Hesperiidae, Lepidoptera, Maximum likelihood, Molecular systematics, Papilionoidea, Parsimony, Target capture
Journal
BMC EVOLUTIONARY BIOLOGY
Volume 18, Issue 1, Pages -
Publisher
Springer Nature
Online
2018-06-19
DOI
10.1186/s12862-018-1216-z
References
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- (2017) Fabricius M.C.B. Domingos et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
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- A genome-wide phylogeny of jumping spiders (Araneae, Salticidae), using anchored hybrid enrichment
- (2017) Wayne P. Maddison et al. ZooKeys
- Expanding anchored hybrid enrichment to resolve both deep and shallow relationships within the spider tree of life
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- (2016) Andrew Donovan Young et al. BMC EVOLUTIONARY BIOLOGY
- Resolving Cypriniformes relationships using an anchored enrichment approach
- (2016) Carla C. Stout et al. BMC EVOLUTIONARY BIOLOGY
- TNT version 1.5, including a full implementation of phylogenetic morphometrics
- (2016) Pablo A. Goloboff et al. CLADISTICS
- Reconstructing a 55-million-year-old butterfly (Lepidoptera: Hesperiidae)
- (2016) Rienk DE JONG EUROPEAN JOURNAL OF ENTOMOLOGY
- Methodological congruence in phylogenomic analyses with morphological support for teiid lizards (Sauria: Teiidae)
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- (2016) Ranjit Kumar Sahoo et al. PeerJ
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- The ecological role of extremely long-proboscid Neotropical butterflies (Lepidoptera: Hesperiidae) in plant-pollinator networks
- (2015) J. A.-S. Bauder et al. Arthropod-Plant Interactions
- ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes
- (2015) Siavash Mirarab et al. BIOINFORMATICS
- Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus group scincid lizards
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- Comparing species tree estimation with large anchored phylogenomic and small Sanger-sequenced molecular datasets: an empirical study on Malagasy pseudoxyrhophiine snakes
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- Targeted capture in evolutionary and ecological genomics
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- A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
- (2015) Richard O. Prum et al. NATURE
- Bridger: a new framework for de novo transcriptome assembly using RNA-seq data
- (2015) Zheng Chang et al. GENOME BIOLOGY
- AliView: a fast and lightweight alignment viewer and editor for large datasets
- (2014) Anders Larsson BIOINFORMATICS
- Diurnal butterfly pollination in the orchidHabenaria radiata
- (2014) Kenji Suetsugu et al. ENTOMOLOGICAL SCIENCE
- FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies
- (2014) Patrick Kück et al. Frontiers in Zoology
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Phylogenomics provides strong evidence for relationships of butterflies and moths
- (2014) A. Y. Kawahara et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- High-Throughput Genomic Data in Systematics and Phylogenetics
- (2013) Emily Moriarty Lemmon et al. Annual Review of Ecology Evolution and Systematics
- Ultrafast Approximation for Phylogenetic Bootstrap
- (2013) B. Q. Minh et al. MOLECULAR BIOLOGY AND EVOLUTION
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Timing and Patterns in the Taxonomic Diversification of Lepidoptera (Butterflies and Moths)
- (2013) Niklas Wahlberg et al. PLoS One
- The Influence of Rate Heterogeneity among Sites on the Time Dependence of Molecular Rates
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- The Monarch Butterfly Genome Yields Insights into Long-Distance Migration
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- Cretaceous origin and repeated tertiary diversification of the redefined butterflies
- (2011) M. Heikkila et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Search and clustering orders of magnitude faster than BLAST
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- Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon
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- BLAST+: architecture and applications
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- Phylogenetic relationships of subfamilies and circumscription of tribes in the family Hesperiidae (Lepidoptera: Hesperioidea)
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