Factors driving metabolic diversity in the budding yeast subphylum

Trait Correlations in the Genomics Era

(2017) Julia B. Saltz et al.   TRENDS IN ECOLOGY & EVOLUTION

The Genetic Requirements for Pentose Fermentation in Budding Yeast

(2017) Karin Mittelman et al.   G3-Genes Genomes Genetics

Exploring xylose metabolism in Spathaspora species: XYL1.2 from Spathaspora passalidarum as the key for efficient anaerobic xylose fermentation in metabolic engineered Saccharomyces cerevisiae

(2016) Raquel M. Cadete et al.   Biotechnology for Biofuels

The potential for non-adaptive origins of evolutionary innovations in central carbon metabolism

(2016) Sayed-Rzgar Hosseini et al.   BMC Systems Biology

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Molecular and cellular bases of adaptation to a changing environment in microorganisms

(2016) Clara Bleuven et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Maltase protein ofOgataea (Hansenula) polymorphais a counterpart to the resurrected ancestor protein ancMALS of yeast maltases and isomaltases

(2016) Katrin Viigand et al.   YEAST

Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae

(2016) Trey K. Sato et al.   PLoS Genetics

The Oenological Potential of Hanseniaspora uvarum in Simultaneous and Sequential Co-fermentation with Saccharomyces cerevisiae for Industrial Wine Production

(2016) Mariana Tristezza et al.   Frontiers in Microbiology

Unraveling the genetic basis of xylose consumption in engineered Saccharomyces cerevisiae strains

(2016) Leandro Vieira dos Santos et al.   Scientific Reports

Constraints Evolve: Context Dependency of Gene Effects Allows Evolution of Pleiotropy

(2015) Mihaela Pavličev et al.   Annual Review of Ecology Evolution and Systematics

How do regulatory networks evolve and expand throughout evolution?

(2015) Karin Voordeckers et al.   CURRENT OPINION IN BIOTECHNOLOGY

Genomics and the making of yeast biodiversity

(2015) Chris Todd Hittinger et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Temperature and host preferences drive the diversification of Saccharomyces and other yeasts: a survey and the discovery of eight new yeast species

(2015) Kayla Sylvester et al.   FEMS YEAST RESEARCH

Evolution of New Functions De Novo and from Preexisting Genes

(2015) Dan I. Andersson et al.   Cold Spring Harbor Perspectives in Biology

The Evolution of Animal Domestication

(2014) Greger Larson et al.   Annual Review of Ecology Evolution and Systematics

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

The "Domestication Syndrome" in Mammals: A Unified Explanation Based on Neural Crest Cell Behavior and Genetics

(2014) A. S. Wilkins et al.   GENETICS

A High-Definition View of Functional Genetic Variation from Natural Yeast Genomes

(2014) Anders Bergström et al.   MOLECULAR BIOLOGY AND EVOLUTION

Convergent evolution and parallelism in plant domestication revealed by an expanding archaeological record

(2014) D. Q. Fuller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolism impacts upon Candida immunogenicity and pathogenicity at multiple levels

(2014) Alistair J.P. Brown et al.   TRENDS IN MICROBIOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genotypic variation in traits linked to climate and aboveground productivity in a widespread C4grass: evidence for a functional trait syndrome

(2013) Michael J. Aspinwall et al.   NEW PHYTOLOGIST

Carbon Catabolite Control in Candida albicans: New Wrinkles in Metabolism

(2013) M. C. Lorenz   mBio

Contrasting trait syndromes in angiosperms and conifers are associated with different responses of tree growth to temperature on a large scale

(2013) Jofre Carnicer et al.   Frontiers in Plant Science

Relationships among genera of theSaccharomycotina(Ascomycota) from multigene phylogenetic analysis of type species

(2012) Cletus P. Kurtzman et al.   FEMS YEAST RESEARCH

Simultaneous utilization of glucose, xylose and arabinose in the presence of acetate by a consortium of Escherichia coli strains

(2012) Tian Xia et al.   Microbial Cell Factories

Assembling an ant community: species functional traits reflect environmental filtering

(2012) Philipp T. Wiescher et al.   OECOLOGIA

Multilocus Phylogenetic Study of the Scheffersomyces Yeast Clade and Characterization of the N-Terminal Region of Xylose Reductase Gene

(2012) Hector Urbina et al.   PLoS One

Reconstruction of Ancestral Metabolic Enzymes Reveals Molecular Mechanisms Underlying Evolutionary Innovation through Gene Duplication

(2012) Karin Voordeckers et al.   PLOS BIOLOGY

Effect of co-fermentation with Saccharomyces cerevisiae and Torulaspora delbrueckii or Metschnikowia pulcherrima on the aroma and sensory properties of mango wine

(2011) Varakumar Sadineni et al.   ANNALS OF MICROBIOLOGY

Comparative genomics of xylose-fermenting fungi for enhanced biofuel production

(2011) Dana J. Wohlbach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Archaeorhizomycetes: Unearthing an Ancient Class of Ubiquitous Soil Fungi

(2011) A. Rosling et al.   SCIENCE

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Selectivity in Mammalian Extinction Risk and Threat Types: a New Measure of Phylogenetic Signal Strength in Binary Traits

(2010) SUSANNE A. FRITZ et al.   CONSERVATION BIOLOGY

Phylogeny, niche conservatism and the latitudinal diversity gradient in mammals

(2010) L. B. Buckley et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population genomics of domestic and wild yeasts

(2009) Gianni Liti et al.   NATURE

Systems genetics of complex traits in Drosophila melanogaster

(2009) Julien F Ayroles et al.   NATURE GENETICS

Using Phylogenetic, Functional and Trait Diversity to Understand Patterns of Plant Community Productivity

(2009) Marc W. Cadotte et al.   PLoS One

Natural Populations of Saccharomyces kudriavzevii in Portugal Are Associated with Oak Bark and Are Sympatric with S. cerevisiae and S. paradoxus

(2008) J. P. Sampaio et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY