Molecular and cellular bases of adaptation to a changing environment in microorganisms

High Persister Mutants in Mycobacterium tuberculosis

(2016) Heather L. Torrey et al.   PLoS One

Epistasis between antibiotic resistance mutations and genetic background shape the fitness effect of resistance across species ofPseudomonas

(2016) T. Vogwill et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Stochastic Switching of Cell Fate in Microbes

(2015) Thomas M. Norman et al.   Annual Review of Microbiology

Targeting the Adaptability of Heterogeneous Aneuploids

(2015) Guangbo Chen et al.   CELL

Shift and adapt: the costs and benefits of karyotype variations

(2015) Aleeza C Gerstein et al.   CURRENT OPINION IN MICROBIOLOGY

Microbial bet-hedging: the power of being different

(2015) Ard Jan Grimbergen et al.   CURRENT OPINION IN MICROBIOLOGY

Temporal variation in antibiotic environments slows down resistance evolution in pathogenicPseudomonas aeruginosa

(2015) Roderich Roemhild et al.   Evolutionary Applications

Fighting microbial drug resistance: a primer on the role of evolutionary biology in public health

(2015) Gabriel G. Perron et al.   Evolutionary Applications

The yeast galactose network as a quantitative model for cellular memory

(2015) Sarah R. Stockwell et al.   Molecular BioSystems

Evolutionary rescue by compensatory mutations is constrained by genomic and environmental backgrounds

(2015) M. Filteau et al.   Molecular Systems Biology

Elucidating the molecular architecture of adaptation via evolve and resequence experiments

(2015) Anthony Long et al.   NATURE REVIEWS GENETICS

Concepts in solid tumor evolution

(2015) Arend Sidow et al.   TRENDS IN GENETICS

Thermotolerant Yeast Strains Adapted by Laboratory Evolution Show Trade-Off at Ancestral Temperatures and Preadaptation to Other Stresses

(2015) Luis Caspeta et al.   mBio

Fitness Trade-Offs Associated with the Evolution of Resistance to Antifungal Drug Combinations

(2015) Jessica A. Hill et al.   Cell Reports

Population Diversification in a Yeast Metabolic Program Promotes Anticipation of Environmental Shifts

(2015) Ophelia S. Venturelli et al.   PLOS BIOLOGY

The Fitness Consequences of Aneuploidy Are Driven by Condition-Dependent Gene Effects

(2015) Anna B. Sunshine et al.   PLOS BIOLOGY

Using a Sequential Regimen to Eliminate Bacteria at Sublethal Antibiotic Dosages

(2015) Ayari Fuentes-Hernandez et al.   PLOS BIOLOGY

Natural Variation in Preparation for Nutrient Depletion Reveals a Cost–Benefit Tradeoff

(2015) Jue Wang et al.   PLOS BIOLOGY

Spatial Heterogeneity in Drug Concentrations Can Facilitate the Emergence of Resistance to Cancer Therapy

(2015) Feng Fu et al.   PLoS Computational Biology

Evolutionary rescue: linking theory for conservation and medicine

(2014) Helen K. Alexander et al.   Evolutionary Applications

Phenotypic bistability in Escherichia coli's central carbon metabolism

(2014) O. Kotte et al.   Molecular Systems Biology

Bet-hedging during bacterial diauxic shift

(2014) A. Solopova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary rescue in a changing world

(2014) Stephanie M. Carlson et al.   TRENDS IN ECOLOGY & EVOLUTION

Different Levels of Catabolite Repression Optimize Growth in Stable and Variable Environments

(2014) Aaron M. New et al.   PLOS BIOLOGY

Evolution of Escherichia coli rifampicin resistance in an antibiotic-free environment during thermal stress

(2013) Alejandra Rodríguez-Verdugo et al.   BMC EVOLUTIONARY BIOLOGY

Evolutionary rescue in populations ofPseudomonas fluorescensacross an antibiotic gradient

(2013) Johan Ramsayer et al.   Evolutionary Applications

Evolutionary rescue from extinction is contingent on a lower rate of environmental change

(2013) Haley A. Lindsey et al.   NATURE

Elevated Mutagenesis Does Not Explain the Increased Frequency of Antibiotic Resistant Mutants in Starved Aging Colonies

(2013) Sophia Katz et al.   PLoS Genetics

Whole Genome, Whole Population Sequencing Reveals That Loss of Signaling Networks Is the Major Adaptive Strategy in a Constant Environment

(2013) Daniel J. Kvitek et al.   PLoS Genetics

Applying ecological and evolutionary theory to cancer: a long and winding road

(2012) Frédéric Thomas et al.   Evolutionary Applications

Cellular Memory of Acquired Stress Resistance in Saccharomyces cerevisiae

(2012) Q. Guan et al.   GENETICS

Parallel Genetic Changes and Nonparallel Gene-Environment Interactions Characterize the Evolution of Drug Resistance in Yeast

(2012) A. C. Gerstein et al.   GENETICS

Yeast Adapts to a Changing Stressful Environment by Evolving Cross-Protection and Anticipatory Gene Regulation

(2012) Riddhiman Dhar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evolutionary rescue and adaptation to abrupt environmental change depends upon the history of stress

(2012) A. Gonzalez et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Chromosomal duplication is a transient evolutionary solution to stress

(2012) A. H. Yona et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary principles and their practical application

(2011) Andrew P. Hendry et al.   Evolutionary Applications

Bacterial persistence by RNA endonucleases

(2011) Etienne Maisonneuve et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adaptation and Evolutionary Rescue in Metapopulations Experiencing Environmental Deterioration

(2011) G. Bell et al.   SCIENCE

Hunger Artists: Yeast Adapted to Carbon Limitation Show Trade-Offs under Carbon Sufficiency

(2011) Jared W. Wenger et al.   PLoS Genetics

Multiple Means to the Same End: The Genetic Basis of Acquired Stress Resistance in Yeast

(2011) David B. Berry et al.   PLoS Genetics

Persister Cells

(2010) Kim Lewis   Annual Review of Microbiology

Pseudomonas aeruginosa Increases Formation of Multidrug-Tolerant Persister Cells in Response to Quorum-Sensing Signaling Molecules

(2010) N. Moker et al.   JOURNAL OF BACTERIOLOGY

Adaptation of experimental yeast populations to stressful conditions in relation to population size

(2010) P. SAMANI et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Dominant Role for Signal Transduction in the Transcriptional Memory of Yeast GAL Genes

(2010) S. Kundu et al.   MOLECULAR AND CELLULAR BIOLOGY

Gene Amplification and Adaptive Evolution in Bacteria

(2009) Dan I. Andersson et al.   Annual Review of Genetics

Evolutionary rescue can prevent extinction following environmental change

(2009) Graham Bell et al.   ECOLOGY LETTERS

The Fitness Cost of Streptomycin Resistance Depends on rpsL Mutation, Carbon Source and RpoS ( S)

(2009) W. Paulander et al.   GENETICS

Glucose Promotes Stress Resistance in the Fungal Pathogen Candida albicans

(2009) Alexandra Rodaki et al.   MOLECULAR BIOLOGY OF THE CELL

Experimental evolution of bet hedging

(2009) Hubertus J. E. Beaumont et al.   NATURE

Adaptive prediction of environmental changes by microorganisms

(2009) Amir Mitchell et al.   NATURE

Bacterial gene amplification: implications for the evolution of antibiotic resistance

(2009) Linus Sandegren et al.   NATURE REVIEWS MICROBIOLOGY

Stochasticity in evolution

(2009) Thomas Lenormand et al.   TRENDS IN ECOLOGY & EVOLUTION

Population Extinction and the Genetics of Adaptation

(2008) H. Allen Orr et al.   AMERICAN NATURALIST

Stress-activated Genomic Expression Changes Serve a Preparative Role for Impending Stress in Yeast

(2008) David B. Berry et al.   MOLECULAR BIOLOGY OF THE CELL

Relationships among carbohydrate intermediate metabolites and DNA damage and repair in yeast from a systems biology perspective

(2008) Fernanda Barea et al.   MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS

Metabolic gene regulation in a dynamically changing environment

(2008) Matthew R. Bennett et al.   NATURE

Stochastic switching as a survival strategy in fluctuating environments

(2008) Murat Acar et al.   NATURE GENETICS

Memory in Microbes: Quantifying History-Dependent Behavior in a Bacterium

(2008) Denise M. Wolf et al.   PLoS One

Bet-hedging and epigenetic inheritance in bacterial cell development

(2008) J.-W. Veening et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accumulation of mutants in "aging" bacterial colonies is due to growth under selection, not stress-induced mutagenesis

(2008) M. Wrande et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Predictive Behavior Within Microbial Genetic Networks

(2008) I. Tagkopoulos et al.   SCIENCE

Adaptation from standing genetic variation

(2007) R BARRETT et al.   TRENDS IN ECOLOGY & EVOLUTION