THANATOS: an integrative data resource of proteins and post-translational modifications in the regulation of autophagy

Hepatitis B virus–triggered autophagy targets TNFRSF10B/death receptor 5 for degradation to limit TNFSF10/TRAIL response

(2016) Gu-Choul Shin et al.   Autophagy

The Atg17-Atg31-Atg29 complex and Atg11 regulate autophagosome-vacuole fusion

(2016) Xu Liu et al.   Autophagy

Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)

(2016) Daniel J Klionsky et al.   Autophagy

dbPAF: an integrative database of protein phosphorylation in animals and fungi

(2016) Shahid Ullah et al.   Scientific Reports

Mechanisms of Autophagy

(2015) Nobuo N. Noda et al.   Annual Review of Biophysics

Elucidating the composition and conservation of the autophagy pathway in photosynthetic eukaryotes

(2015) Adva Shemi et al.   Autophagy

ncRDeathDB: A comprehensive bioinformatics resource for deciphering network organization of the ncRNA-mediated cell death system

(2015) Deng Wu et al.   Autophagy

Autophagy Regulatory Network — A systems-level bioinformatics resource for studying the mechanism and regulation of autophagy

(2015) Dénes Türei et al.   Autophagy

Taxane anticancer agents: a patent perspective

(2015) Iwao Ojima et al.   EXPERT OPINION ON THERAPEUTIC PATENTS

Crizotinib induces autophagy through inhibition of the STAT3 pathway in multiple lung cancer cell lines

(2015) Liangkun You et al.   Oncotarget

Coming soon to a journal near you—The updated guidelines for the use and interpretation of assays for monitoring autophagy

(2014) Daniel J Klionsky   Autophagy

Atg17/FIP200 localizes to perilysosomal Ref(2)P aggregates and promotes autophagy by activation of Atg1 inDrosophila

(2014) Péter Nagy et al.   Autophagy

A curated census of autophagy-modulating proteins and small molecules

(2014) Philip L Lorenzi et al.   Autophagy

Posttranslational modification of autophagy-related proteins in macroautophagy

(2014) Yangchun Xie et al.   Autophagy

HMGB1-mediated autophagy promotes docetaxel resistance in human lung adenocarcinoma

(2014) Banzhou Pan et al.   Molecular Cancer

Self-consumption: the interplay of autophagy and apoptosis

(2014) Guillermo Mariño et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Necroptosis

(2014) Andreas Linkermann et al.   NEW ENGLAND JOURNAL OF MEDICINE

MiCroKiTS 4.0: a database of midbody, centrosome, kinetochore, telomere and spindle

(2014) Zhengnan Huang et al.   NUCLEIC ACIDS RESEARCH

COSMIC: exploring the world's knowledge of somatic mutations in human cancer

(2014) Simon A. Forbes et al.   NUCLEIC ACIDS RESEARCH

Autophagy promotes paclitaxel resistance of cervical cancer cells: involvement of Warburg effect activated hypoxia-induced factor 1-α-mediated signaling

(2014) X Peng et al.   Cell Death & Disease

dbPPT: a comprehensive database of protein phosphorylation in plants

(2014) Han Cheng et al.   Database-The Journal of Biological Databases and Curation

Connect the dots

(2013) Yifei Li et al.   Autophagy

The axis of MAPK1/3-XBP1u-FOXO1 controls autophagic dynamics in cancer cells

(2013) Ying Zhao et al.   Autophagy

Autophagy and human diseases

(2013) Peidu Jiang et al.   CELL RESEARCH

Historical landmarks of autophagy research

(2013) Yoshinori Ohsumi   CELL RESEARCH

The machinery of macroautophagy

(2013) Yuchen Feng et al.   CELL RESEARCH

Atg38 is required for autophagy-specific phosphatidylinositol 3-kinase complex integrity

(2013) Yasuhiro Araki et al.   JOURNAL OF CELL BIOLOGY

The scaffold protein EPG-7 links cargo–receptor complexes with the autophagic assembly machinery

(2013) Long Lin et al.   JOURNAL OF CELL BIOLOGY

Cell Death Proteomics Database: Consolidating Proteomics Data on Cell Death

(2013) Magnus Ø. Arntzen et al.   JOURNAL OF PROTEOME RESEARCH

CPLM: a database of protein lysine modifications

(2013) Zexian Liu et al.   NUCLEIC ACIDS RESEARCH

The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases

(2013) Sandra Orchard et al.   NUCLEIC ACIDS RESEARCH

EKPD: a hierarchical database of eukaryotic protein kinases and protein phosphatases

(2013) Yongbo Wang et al.   NUCLEIC ACIDS RESEARCH

BLAST: a more efficient report with usability improvements

(2013) Grzegorz M. Boratyn et al.   NUCLEIC ACIDS RESEARCH

Activities at the Universal Protein Resource (UniProt)

(2013)   NUCLEIC ACIDS RESEARCH

Retinoblastoma protein regulates the crosstalk between autophagy and apoptosis and favors glioblastoma resistance to etoposide

(2013) D Biasoli et al.   Cell Death & Disease

yApoptosis: yeast apoptosis database

(2013) Kwanjeera Wanichthanarak et al.   Database-The Journal of Biological Databases and Curation

Systematic analysis of the Plk-mediated phosphoregulation in eukaryotes

(2012) Z. Liu et al.   BRIEFINGS IN BIOINFORMATICS

Loss of a membrane trafficking protein αSNAP induces non-canonical autophagy in human epithelia

(2012) Nayden G. Naydenov et al.   CELL CYCLE

miRDeathDB: a database bridging microRNAs and the programmed cell death

(2012) J Xu et al.   CELL DEATH AND DIFFERENTIATION

Phosphorylation of Atg5 by the Gadd45β–MEKK4-p38 pathway inhibits autophagy

(2012) E Keil et al.   CELL DEATH AND DIFFERENTIATION

Systematic Analysis of Protein Phosphorylation Networks From Phosphoproteomic Data

(2012) Chunxia Song et al.   MOLECULAR & CELLULAR PROTEOMICS

UUCD: a family-based database of ubiquitin and ubiquitin-like conjugation

(2012) Tianshun Gao et al.   NUCLEIC ACIDS RESEARCH

The acquisition of resistance to TNFα in breast cancer cells is associated with constitutive activation of autophagy as revealed by a transcriptome analysis using a custom microarray

(2011) Etienne Moussay et al.   Autophagy

Systems biology of the autophagy-lysosomal pathway

(2011) Anil G. Jegga et al.   Autophagy

SNARE Proteins Are Required for Macroautophagy

(2011) Usha Nair et al.   CELL

Programmed Cell Death in Animal Development and Disease

(2011) Yaron Fuchs et al.   CELL

Autophagy and Aging

(2011) David C. Rubinsztein et al.   CELL

Multiple pathways counteract cell death induced by RB1 loss: Implications for cancer

(2011) Giovanni Ciavarra et al.   CELL CYCLE

Autophagy Required for Hepatitis B Virus Replication in Transgenic Mice

(2011) Y. Tian et al.   JOURNAL OF VIROLOGY

ApoptoProteomics, an Integrated Database for Analysis of Proteomics Data Obtained from Apoptotic Cells

(2011) Magnus Ø. Arntzen et al.   MOLECULAR & CELLULAR PROTEOMICS

Autophagy in immunity and inflammation

(2011) Beth Levine et al.   NATURE

MINT, the molecular interaction database: 2012 update

(2011) Luana Licata et al.   NUCLEIC ACIDS RESEARCH

Control of Mitotic Spindle Angle by the RAS-Regulated ERK1/2 Pathway Determines Lung Tube Shape

(2011) Nan Tang et al.   SCIENCE

The RB-E2F1 Pathway Regulates Autophagy

(2010) H. Jiang et al.   CANCER RESEARCH

DeathBase: a database on structure, evolution and function of proteins involved in apoptosis and other forms of cell death

(2010) J Díez et al.   CELL DEATH AND DIFFERENTIATION

International network of cancer genome projects

(2010) Thomas J. Hudson (Chairperson) et al.   NATURE

Eaten alive: a history of macroautophagy

(2010) Zhifen Yang et al.   NATURE CELL BIOLOGY

The Autophagy Database: an all-inclusive information resource on autophagy that provides nourishment for research

(2010) K. Homma et al.   NUCLEIC ACIDS RESEARCH

Role of ULK-FIP200 complex in mammalian autophagy: FIP200, a counterpart of yeast Atg17?

(2009) Taichi Hara et al.   Autophagy

Targeting the p27 E3 ligase SCFSkp2 results in p27- and Skp2-mediated cell-cycle arrest and activation of autophagy

(2008) Q. Chen et al.   BLOOD

Identification of a Molecular Signaling Network that Regulates a Cellular Necrotic Cell Death Pathway

(2008) Junichi Hitomi et al.   CELL

The Atg8 Conjugation System Is Indispensable for Proper Development of Autophagic Isolation Membranes in Mice

(2008) Yu-shin Sou et al.   MOLECULAR BIOLOGY OF THE CELL

Taxanes, microtubules and chemoresistant breast cancer

(2007) Barbara T. McGrogan et al.   BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER