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Title
Chromatin, DNA structure and alternative splicing
Authors
Keywords
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Journal
FEBS LETTERS
Volume 589, Issue 22, Pages 3370-3378
Publisher
Wiley
Online
2015-08-19
DOI
10.1016/j.febslet.2015.08.002
References
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Note: Only part of the references are listed.- Modifications of RNA polymerase II CTD: Connections to the histone code and cellular function
- (2015) Rakesh Srivastava et al. BIOTECHNOLOGY ADVANCES
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- (2015) Dirk Schübeler NATURE
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- (2015) Sarah Sainsbury et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Getting up to speed with transcription elongation by RNA polymerase II
- (2015) Iris Jonkers et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Transcription blockage by stable H-DNA analogs in vitro
- (2015) Shristi Pandey et al. NUCLEIC ACIDS RESEARCH
- A positioned +1 nucleosome enhances promoter-proximal pausing
- (2015) Silvia Jimeno-González et al. NUCLEIC ACIDS RESEARCH
- Pack, unpack, bend, twist, pull, push: the physical side of gene expression
- (2014) Christophe Lavelle CURRENT OPINION IN GENETICS & DEVELOPMENT
- Role of DNA sequence based structural features of promoters in transcription initiation and gene expression
- (2014) Manju Bansal et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- The contribution of co-transcriptional RNA:DNA hybrid structures to DNA damage and genome instability
- (2014) Stephan Hamperl et al. DNA REPAIR
- FANCJ promotes DNA synthesis through G-quadruplex structures
- (2014) P. Castillo Bosch et al. EMBO JOURNAL
- Determinants of G quadruplex-induced epigenetic instability in REV1-deficient cells
- (2014) D. Schiavone et al. EMBO JOURNAL
- G-quadruplex formation enhances splicing efficiency of PAX9 intron 1
- (2014) Mariana Martins Ribeiro et al. HUMAN GENETICS
- How Slow RNA Polymerase II Elongation Favors Alternative Exon Skipping
- (2014) Gwendal Dujardin et al. MOLECULAR CELL
- R-loops induce repressive chromatin marks over mammalian gene terminators
- (2014) Konstantina Skourti-Stathaki et al. NATURE
- G quadruplexes are genomewide targets of transcriptional helicases XPB and XPD
- (2014) Lucas T Gray et al. Nature Chemical Biology
- Histone core modifications regulating nucleosome structure and dynamics
- (2014) Peter Tessarz et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Identification and characterization of RNA guanine-quadruplex binding proteins
- (2014) Annekathrin von Hacht et al. NUCLEIC ACIDS RESEARCH
- New concepts in DNA methylation
- (2014) Albert Jeltsch et al. TRENDS IN BIOCHEMICAL SCIENCES
- Genome-wide dynamics of Pol II elongation and its interplay with promoter proximal pausing, chromatin, and exons
- (2014) Iris Jonkers et al. eLife
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- (2013) Alika K Maunakea et al. CELL RESEARCH
- DNA Sequences That Interfere with Transcription: Implications for Genome Function and Stability
- (2013) Boris P. Belotserkovskii et al. CHEMICAL REVIEWS
- Alternative splicing: a pivotal step between eukaryotic transcription and translation
- (2013) Alberto R. Kornblihtt et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Associations between intronic non-B DNA structures and exon skipping
- (2013) Z. T.-Y. Tsai et al. NUCLEIC ACIDS RESEARCH
- Torque modulates nucleosome stability and facilitates H2A/H2B dimer loss
- (2013) Maxim Y. Sheinin et al. Nature Communications
- RNA Polymerase II Elongation Control
- (2012) Qiang Zhou et al. Annual Review of Biochemistry
- Dynamic phosphorylation patterns of RNA polymerase II CTD during transcription
- (2012) Martin Heidemann et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Nucleosomal Elements that Control the Topography of the Barrier to Transcription
- (2012) Lacramioara Bintu et al. CELL
- The RNA polymerase II CTD coordinates transcription and RNA processing
- (2012) J.-P. Hsin et al. GENES & DEVELOPMENT
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- (2012) H. Tilgner et al. GENOME RESEARCH
- Triplex DNA-binding proteins are associated with clinical outcomes revealed by proteomic measurements in patients with colorectal cancer
- (2012) Laura D Nelson et al. Molecular Cancer
- DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation
- (2012) Pierre Close et al. NATURE
- DNA secondary structures: stability and function of G-quadruplex structures
- (2012) Matthew L. Bochman et al. NATURE REVIEWS GENETICS
- Transcription blockage by homopurine DNA sequences: role of sequence composition and single-strand breaks
- (2012) Boris P. Belotserkovskii et al. NUCLEIC ACIDS RESEARCH
- Overcoming the nucleosome barrier during transcript elongation
- (2012) Steven J. Petesch et al. TRENDS IN GENETICS
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- (2011) Diana J. Uribe et al. BIOCHEMISTRY
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- (2011) Diana Y. Vargas et al. CELL
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- (2011) Reini F. Luco et al. CELL
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- (2011) Andrew J Bannister et al. CELL RESEARCH
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- (2011) Y. L. Khodor et al. GENES & DEVELOPMENT
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- (2011) Mireille Melko et al. HUMAN MOLECULAR GENETICS
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- (2011) M. Montes et al. MOLECULAR AND CELLULAR BIOLOGY
- CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing
- (2011) Sanjeev Shukla et al. NATURE
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- (2011) Subhajyoti De et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
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- (2011) Violaine Saint-André et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
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- (2010) A. K. Ramani et al. GENOME RESEARCH
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- Neuronal cell depolarization induces intragenic chromatin modifications affecting NCAM alternative splicing
- (2009) I. E. Schor et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Co-transcriptional splicing of constitutive and alternative exons
- (2009) A. Pandya-Jones et al. RNA
- Nucleosomal Fluctuations Govern the Transcription Dynamics of RNA Polymerase II
- (2009) C. Hodges et al. SCIENCE
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- (2009) Kasper Daniel Hansen et al. PLoS Genetics
- Histones: Annotating Chromatin
- (2008) Eric I. Campos et al. Annual Review of Genetics
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