Parallel genome reduction in symbionts descended from closely related free-living bacteria
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Parallel genome reduction in symbionts descended from closely related free-living bacteria
Authors
Keywords
-
Journal
Nature Ecology & Evolution
Volume 1, Issue 8, Pages 1160-1167
Publisher
Springer Nature
Online
2017-07-20
DOI
10.1038/s41559-017-0237-0
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Microdiversification of a Pelagic Polynucleobacter Species Is Mainly Driven by Acquisition of Genomic Islands from a Partially Interspecific Gene Pool
- (2016) Matthias Hoetzinger et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Reclassification of four Polynucleobacter necessarius strains as representatives of Polynucleobacter asymbioticus comb. nov., Polynucleobacter duraquae sp. nov., Polynucleobacter yangtzensis sp. nov. and Polynucleobacter sinensis sp. nov., and emended description of Polynucleobacter necessarius
- (2016) Martin W. Hahn et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Complete ecological isolation and cryptic diversity in Polynucleobacter bacteria not resolved by 16S rRNA gene sequences
- (2016) Martin W Hahn et al. ISME Journal
- Adaptation by Deletogenic Replication Slippage in a Nascent Symbiont
- (2016) Adam L. Clayton et al. MOLECULAR BIOLOGY AND EVOLUTION
- BRENDA in 2017: new perspectives and new tools in BRENDA
- (2016) Sandra Placzek et al. NUCLEIC ACIDS RESEARCH
- InterPro in 2017—beyond protein family and domain annotations
- (2016) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- KEGG: new perspectives on genomes, pathways, diseases and drugs
- (2016) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Repeated replacement of an intrabacterial symbiont in the tripartite nested mealybug symbiosis
- (2016) Filip Husnik et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Lineage-Specific Patterns of Genome Deterioration in Obligate Symbionts of Sharpshooter Leafhoppers
- (2015) Gordon M. Bennett et al. Genome Biology and Evolution
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Settling Down: The Genome of Serratia symbiotica from the Aphid Cinara tujafilina Zooms in on the Process of Accommodation to a Cooperative Intracellular Life
- (2014) Alejandro Manzano-Marín et al. Genome Biology and Evolution
- Genome Degeneration and Adaptation in a Nascent Stage of Symbiosis
- (2014) Kelly F. Oakeson et al. Genome Biology and Evolution
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Phylogenetic analysis of symbionts in feather-feeding lice of the genus Columbicola: evidence for repeated symbiont replacements
- (2013) Wendy A Smith et al. BMC EVOLUTIONARY BIOLOGY
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases
- (2013) Ron Caspi et al. NUCLEIC ACIDS RESEARCH
- RefSeq microbial genomes database: new representation and annotation strategy
- (2013) Tatiana Tatusova et al. NUCLEIC ACIDS RESEARCH
- Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria
- (2013) V. Boscaro et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Betaproteobacterial symbionts of the ciliate Euplotes: origin and tangled evolutionary path of an obligate microbial association
- (2012) Claudia Vannini et al. ENVIRONMENTAL MICROBIOLOGY
- Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
- (2012) Sarahi L Garcia et al. ISME Journal
- Modeling Protein Evolution with Several Amino Acid Replacement Matrices Depending on Site Rates
- (2012) S. Q. Le et al. MOLECULAR BIOLOGY AND EVOLUTION
- An Integrated Pipeline for de Novo Assembly of Microbial Genomes
- (2012) Andrew Tritt et al. PLoS One
- MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
- (2012) Fredrik Ronquist et al. SYSTEMATIC BIOLOGY
- A Novel Human-Infection-Derived Bacterium Provides Insights into the Evolutionary Origins of Mutualistic Insect–Bacterial Symbioses
- (2012) Adam L. Clayton et al. PLoS Genetics
- An Interdependent Metabolic Patchwork in the Nested Symbiosis of Mealybugs
- (2011) John P. McCutcheon et al. CURRENT BIOLOGY
- Massive Genomic Decay in Serratia symbiotica, a Recently Evolved Symbiont of Aphids
- (2011) Gaelen R. Burke et al. Genome Biology and Evolution
- The genome of the obligate endobacterium of an AM fungus reveals an interphylum network of nutritional interactions
- (2011) Stefano Ghignone et al. ISME Journal
- Extreme genome reduction in symbiotic bacteria
- (2011) John P. McCutcheon et al. NATURE REVIEWS MICROBIOLOGY
- Serratia symbiotica from the Aphid Cinara cedri: A Missing Link from Facultative to Obligate Insect Endosymbiont
- (2011) Araceli Lamelas et al. PLoS Genetics
- BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments
- (2010) Alexis Criscuolo et al. BMC EVOLUTIONARY BIOLOGY
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- Ubiquity ofPolynucleobacter necessariusssp.asymbioticusin lentic freshwater habitats of a heterogenous 2000 km2area
- (2009) Jitka Jezberová et al. ENVIRONMENTAL MICROBIOLOGY
- The Dynamics and Time Scale of Ongoing Genomic Erosion in Symbiotic Bacteria
- (2009) N. A. Moran et al. SCIENCE
- Genomics and Evolution of Heritable Bacterial Symbionts
- (2008) Nancy A. Moran et al. Annual Review of Genetics
- Empirical profile mixture models for phylogenetic reconstruction
- (2008) Le Si Quang et al. BIOINFORMATICS
- POPULATION STRUCTURE, LEVELS OF SELECTION, AND THE EVOLUTION OF INTRACELLULAR SYMBIONTS
- (2008) Brendan O'Fallon EVOLUTION
- An Improved General Amino Acid Replacement Matrix
- (2008) S. Q. Le et al. MOLECULAR BIOLOGY AND EVOLUTION
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now