Complete ecological isolation and cryptic diversity in Polynucleobacter bacteria not resolved by 16S rRNA gene sequences

Local–global overlap in diversity informs mechanisms of bacterial biogeography

(2015) Joshua A Livermore et al.   ISME Journal

Auxotrophy and intrapopulation complementary in the ‘interactome’ of a cultivated freshwater model community

(2015) Sarahi L. Garcia et al.   MOLECULAR ECOLOGY

Microbial species delineation using whole genome sequences

(2015) Neha J. Varghese et al.   NUCLEIC ACIDS RESEARCH

Global phylogeography of pelagicPolynucleobacterbacteria: Restricted geographic distribution of subgroups, isolation by distance and influence of climate

(2014) Martin W. Hahn et al.   ENVIRONMENTAL MICROBIOLOGY

Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes

(2014) M. Kim et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Explaining microbial genomic diversity in light of evolutionary ecology

(2014) Otto X. Cordero et al.   NATURE REVIEWS MICROBIOLOGY

Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria

(2013) V. Boscaro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Community Structure in the Drinking Water Microbiome Is Governed by Filtration Processes

(2012) Ameet J. Pinto et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Unraveling assembly of stream biofilm communities

(2012) Katharina Besemer et al.   ISME Journal

The Passive Yet Successful Way of Planktonic Life: Genomic and Experimental Analysis of the Ecology of a Free-Living Polynucleobacter Population

(2012) Martin W. Hahn et al.   PLoS One

Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1T)

(2012) Linda Meincke et al.   Standards in Genomic Sciences

Ubiquity of Polynucleobacter necessarius subspecies asymbioticus results from ecological diversification

(2011) Jan Jezbera et al.   ENVIRONMENTAL MICROBIOLOGY

High-throughput single-cell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton

(2011) Manuel Martinez-Garcia et al.   ISME Journal

A Guide to the Natural History of Freshwater Lake Bacteria

(2011) R. J. Newton et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

IMG: the integrated microbial genomes database and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

Metagenomics of the Water Column in the Pristine Upper Course of the Amazon River

(2011) Rohit Ghai et al.   PLoS One

Competitive and cooperative metabolic interactions in bacterial communities

(2011) Shiri Freilich et al.   Nature Communications

Ecological consequences of bacterioplankton lifestyles: changes in concepts are needed

(2010) Hans-Peter Grossart   Environmental Microbiology Reports

Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison

(2010) Alexander F. Auch et al.   Standards in Genomic Sciences

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

The presence of the glycolysis operon in SAR11 genomes is positively correlated with ocean productivity

(2009) M. S. Schwalbach et al.   ENVIRONMENTAL MICROBIOLOGY

Ubiquity ofPolynucleobacter necessariusssp.asymbioticusin lentic freshwater habitats of a heterogenous 2000 km2area

(2009) Jitka Jezberová et al.   ENVIRONMENTAL MICROBIOLOGY

Emended description of the genus Polynucleobacter and the species Polynucleobacter necessarius and proposal of two subspecies, P. necessarius subsp. necessarius subsp. nov. and P. necessarius subsp. asymbioticus subsp. nov.

(2009) M. W. Hahn et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Community Structure of Acid-Impacted Lakes: What Controls Diversity?

(2008) S. F. Percent et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Facilitation of Robust Growth of Prochlorococcus Colonies and Dilute Liquid Cultures by "Helper" Heterotrophic Bacteria

(2008) J. J. Morris et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effective isolation of bacterioplankton genus Polynucleobacter from freshwater environments grown on photochemically degraded dissolved organic matter

(2008) Keiji Watanabe et al.   FEMS MICROBIOLOGY ECOLOGY

Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter

(2008) Elena Ivars-Martinez et al.   ISME Journal