A carbon nanotube reporter of microRNA hybridization events in vivo

Cell Membrane Proteins Modulate the Carbon Nanotube Optical Bandgap via Surface Charge Accumulation

(2015) Daniel Roxbury et al.   ACS Nano

Label-Free Nanoplasmonic-Based Short Noncoding RNA Sensing at Attomolar Concentrations Allows for Quantitative and Highly Specific Assay of MicroRNA-10b in Biological Fluids and Circulating Exosomes

(2015) Gayatri K. Joshi et al.   ACS Nano

MicroRNA Detection: Current Technology and Research Strategies

(2015) Eric A. Hunt et al.   Annual Review of Analytical Chemistry

Comparative Dynamics and Sequence Dependence of DNA and RNA Binding to Single Walled Carbon Nanotubes

(2015) Markita P. Landry et al.   Journal of Physical Chemistry C

Kinetic fingerprinting to identify and count single nucleic acids

(2015) Alexander Johnson-Buck et al.   NATURE BIOTECHNOLOGY

Exosomal miRNAs from Peritoneum Lavage Fluid as Potential Prognostic Biomarkers of Peritoneal Metastasis in Gastric Cancer

(2015) Motohiko Tokuhisa et al.   PLoS One

Hyperspectral Microscopy of Near-Infrared Fluorescence Enables 17-Chirality Carbon Nanotube Imaging

(2015) Daniel Roxbury et al.   Scientific Reports

Biosensor-based microRNA detection: techniques, design, performance, and challenges

(2014) Blake N. Johnson et al.   ANALYST

Clinical validation of the detection of KRAS and BRAF mutations from circulating tumor DNA

(2014) Alain R Thierry et al.   NATURE MEDICINE

Structural basis for microRNA targeting

(2014) N. T. Schirle et al.   SCIENCE

Programmable energy landscapes for kinetic control of DNA strand displacement

(2014) Robert R. F. Machinek et al.   Nature Communications

Carbon nanotubes as optical biomedical sensors

(2013) Sebastian Kruss et al.   ADVANCED DRUG DELIVERY REVIEWS

MicroRNA: Function, Detection, and Bioanalysis

(2013) Haifeng Dong et al.   CHEMICAL REVIEWS

A pilot study of urinary microRNA as a biomarker for urothelial cancer

(2013) Jaime Snowdon et al.   CUAJ-Canadian Urological Association Journal

Detection of MicroRNA as Novel Biomarkers of Epithelial Ovarian Cancer From the Serum of Ovarian Cancer Patient

(2013) Ye-Won Chung et al.   INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER

Serum miR-21 as a Diagnostic and Prognostic Biomarker in Colorectal Cancer

(2013) Yuji Toiyama et al.   JNCI-Journal of the National Cancer Institute

In vivo biosensing via tissue-localizable near-infrared-fluorescent single-walled carbon nanotubes

(2013) Nicole M. Iverson et al.   Nature Nanotechnology

Analysis of Circulating Tumor DNA to Monitor Metastatic Breast Cancer

(2013) Sarah-Jane Dawson et al.   NEW ENGLAND JOURNAL OF MEDICINE

On the biophysics and kinetics of toehold-mediated DNA strand displacement

(2013) Niranjan Srinivas et al.   NUCLEIC ACIDS RESEARCH

MicroRNA-494 Reduces ATF3 Expression and Promotes AKI

(2012) Y.-F. Lan et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

The Crystal Structure of Human Argonaute2

(2012) N. T. Schirle et al.   SCIENCE

Analysis of Circulating MicroRNA: Preanalytical and Analytical Challenges

(2011) J. S. McDonald et al.   CLINICAL CHEMISTRY

Optimization of the CHARMM Additive Force Field for DNA: Improved Treatment of the BI/BII Conformational Equilibrium

(2011) Katarina Hart et al.   Journal of Chemical Theory and Computation

MDAnalysis: A toolkit for the analysis of molecular dynamics simulations

(2011) Naveen Michaud-Agrawal et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Characterization of extracellular circulating microRNA

(2011) Andrey Turchinovich et al.   NUCLEIC ACIDS RESEARCH

Peptide secondary structure modulates single-walled carbon nanotube fluorescence as a chaperone sensor for nitroaromatics

(2011) D. A. Heller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma

(2011) J. D. Arroyo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Urine TMPRSS2:ERG Fusion Transcript Stratifies Prostate Cancer Risk in Men with Elevated Serum PSA

(2011) S. A. Tomlins et al.   Science Translational Medicine

MiR-96 and miR-183 detection in urine serve as potential tumor markers of urothelial carcinoma: correlation with stage and grade, and comparison with urinary cytology

(2010) Yasutoshi Yamada et al.   CANCER SCIENCE

The MicroRNA Spectrum in 12 Body Fluids

(2010) J. A. Weber et al.   CLINICAL CHEMISTRY

MicroRNA profiling: separating signal from noise

(2010) Monya Baker   NATURE METHODS

Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors

(2010) Meni Wanunu et al.   Nature Nanotechnology

Enhanced Sampling in the Well-Tempered Ensemble

(2010) M. Bonomi et al.   PHYSICAL REVIEW LETTERS

miR-19 is a key oncogenic component of mir-17-92

(2009) V. Olive et al.   GENES & DEVELOPMENT

The Nature of DNA-Base–Carbon-Nanotube Interactions

(2009) Robert R. Johnson et al.   Small

Cell-free DNA in the Peritoneal Effluent of Peritoneal Dialysis Solutions

(2009) Jernej Pajek et al.   THERAPEUTIC APHERESIS AND DIALYSIS

A robust methodology to study urine microRNA as tumor marker: microRNA-126 and microRNA-182 are related to urinary bladder cancer

(2009) Merle Hanke et al.   UROLOGIC ONCOLOGY-SEMINARS AND ORIGINAL INVESTIGATIONS

Detection of elevated levels of tumour-associated microRNAs in serum of patients with diffuse large B-cell lymphoma

(2008) Charles H. Lawrie et al.   BRITISH JOURNAL OF HAEMATOLOGY

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

Atomic Force Microscopy Studies of DNA-Wrapped Carbon Nanotube Structure and Binding to Quantum Dots

(2008) Jennifer F. Campbell et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Carbon Nanotube-Quenched Fluorescent Oligonucleotides: Probes that Fluoresce upon Hybridization

(2008) Ronghua Yang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

PCA3: A Molecular Urine Assay for Predicting Prostate Biopsy Outcome

(2008) Ina L. Deras et al.   JOURNAL OF UROLOGY

Subdiffraction Far-Field Imaging of Luminescent Single-Walled Carbon Nanotubes

(2008) Laurent Cognet et al.   NANO LETTERS

The miR-200 family and miR-205 regulate epithelial to mesenchymal transition by targeting ZEB1 and SIP1

(2008) Philip A. Gregory et al.   NATURE CELL BIOLOGY

Circulating microRNAs as stable blood-based markers for cancer detection

(2008) P. S. Mitchell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-Molecule Detection and Mismatch Discrimination of Unlabeled DNA Targets

(2007) Anders Gunnarsson et al.   NANO LETTERS