Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants

Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software

(2017) Alexander Sczyrba et al.   NATURE METHODS

Solid-state anaerobic digestion of lignocellulosic biomass: Recent progress and perspectives

(2016) Xumeng Ge et al.   BIORESOURCE TECHNOLOGY

Deeper insight into the structure of the anaerobic digestion microbial community; the biogas microbiome database is expanded with 157 new genomes

(2016) Laura Treu et al.   BIORESOURCE TECHNOLOGY

Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates

(2016) Irena Maus et al.   Biotechnology for Biofuels

Cellular adhesiveness and cellulolytic capacity in Anaerolineae revealed by omics-based genome interpretation

(2016) Yu Xia et al.   Biotechnology for Biofuels

Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants

(2016) Yvonne Stolze et al.   Biotechnology for Biofuels

Metagenomic analysis and functional characterization of the biogas microbiome using high throughput shotgun sequencing and a novel binning strategy

(2016) Stefano Campanaro et al.   Biotechnology for Biofuels

Biofuels from food processing wastes

(2016) Zhanying Zhang et al.   CURRENT OPINION IN BIOTECHNOLOGY

Bacterial chemotaxis: information processing, thermodynamics, and behavior

(2016) Gabriele Micali et al.   CURRENT OPINION IN MICROBIOLOGY

Genome-centric resolution of microbial diversity, metabolism and interactions in anaerobic digestion

(2016) Inka Vanwonterghem et al.   ENVIRONMENTAL MICROBIOLOGY

Trends in Global Greenhouse Gas Emissions from 1990 to 2010

(2016) Arunima Malik et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

Fuelling the future: microbial engineering for the production of sustainable biofuels

(2016) James C. Liao et al.   NATURE REVIEWS MICROBIOLOGY

Recovering complete and draft population genomes from metagenome datasets

(2016) Naseer Sangwan et al.   Microbiome

Syntrophic Growth of Desulfovibrio alaskensis Requires Genes for H2and Formate Metabolism as Well as Those for Flagellum and Biofilm Formation

(2015) Lee R. Krumholz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Degradation efficiency of agricultural biogas plants – A full-scale study

(2015) Stephan Ruile et al.   BIORESOURCE TECHNOLOGY

Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions

(2015) Yvonne Stolze et al.   Biotechnology for Biofuels

Chemotaxis Control of Transient Cell Aggregation

(2015) Gladys Alexandre   JOURNAL OF BACTERIOLOGY

Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant

(2015) Irena Maus et al.   JOURNAL OF BIOTECHNOLOGY

Review on research achievements of biogas from anaerobic digestion

(2015) Chunlan Mao et al.   RENEWABLE & SUSTAINABLE ENERGY REVIEWS

Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant

(2015) Andreas Bremges et al.   GigaScience

Bacterial chemoreceptors and chemoeffectors

(2014) Shuangyu Bi et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

An introduction to the analysis of shotgun metagenomic data

(2014) Thomas J. Sharpton   Frontiers in Plant Science

Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms

(2013) Felix G Eikmeyer et al.   Biotechnology for Biofuels

The Ferredoxin:NAD+Oxidoreductase (Rnf) from the AcetogenAcetobacterium woodiiRequires Na+and Is Reversibly Coupled to the Membrane Potential

(2013) Verena Hess et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Biogas Production from Protein-Rich Biomass: Fed-Batch Anaerobic Fermentation of Casein and of Pig Blood and Associated Changes in Microbial Community Composition

(2013) Etelka Kovács et al.   PLoS One

Classification of metagenomic sequences: methods and challenges

(2012) S. S. Mande et al.   BRIEFINGS IN BIOINFORMATICS

Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing

(2012) Martha Zakrzewski et al.   JOURNAL OF BIOTECHNOLOGY

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

Genomic Insights into Syntrophy: The Paradigm for Anaerobic Metabolic Cooperation

(2010) Jessica R. Sieber et al.   Annual Review of Microbiology

Hydrogen production by hyperthermophilic and extremely thermophilic bacteria and archaea: mechanisms for reductant disposal

(2010) Marcel R.A. Verhaart et al.   ENVIRONMENTAL TECHNOLOGY

Bacterial Na+-translocating ferredoxin:NAD+ oxidoreductase

(2010) E. Biegel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Local Gene Regulation Details a Recognition Code within the LacI Transcriptional Factor Family

(2010) Francisco M. Camas et al.   PLoS Computational Biology

Biogas production: current state and perspectives

(2009) Peter Weiland   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Syntrophy in anaerobic global carbon cycles

(2009) Michael J McInerney et al.   CURRENT OPINION IN BIOTECHNOLOGY

Diversity of the resident microbiota in a thermophilic municipal biogas plant

(2008) Agnes Weiss et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Quantitative approaches to the study of bistability in the lac operon of Escherichia coli

(2008) M. Santillan et al.   Journal of the Royal Society Interface

Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems

(2008) A. L. Davidson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS