Barcode index number, taxonomic rank and modes of speciation: examples from fish

Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics

(2016) Scott V. Edwards et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Molecular systematics and DNA barcoding of Altai osmans, oreoleuciscus (pisces, cyprinidae, and leuciscinae), and their nearest relatives, inferred from sequences of cytochrome b (Cyt-b), cytochrome oxidase c (Co-1), and complete mitochondrial genome

(2016) Yuri Phedorovich Kartavtsev et al.   Mitochondrial DNA Part A

Tree of Life Reveals Clock-Like Speciation and Diversification

(2015) S. Blair Hedges et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeny and polyploidy: Resolving the classification of cyprinine fishes (Teleostei: Cypriniformes)

(2015) Lei Yang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Glacial history of the European marine mussels Mytilus, inferred from distribution of mitochondrial DNA lineages

(2014) B Śmietanka et al.   HEREDITY

Phylogenetic relationships of Russian far eastern flatfish (Pleuronectiformes, Pleuronectidae) based on two mitochondrial gene sequences,Co-1andCyt-b, with inferences in order phylogeny using complete mitogenome data

(2014) Yuri Phedorovich Kartavtsev et al.   Mitochondrial DNA

DNA-barcoding of perch-like fishes (Actinopterygii: Perciformes) from far-eastern seas of Russia with taxonomic remarks for some groups

(2014) S. V. Turanov et al.   Mitochondrial DNA

Mitogenomics of recombinant mitochondrial genomes of Baltic Sea Mytilus mussels

(2014) Małgorzata Zbawicka et al.   MOLECULAR GENETICS AND GENOMICS

Can DNA barcoding accurately discriminate megadiverse Neotropical freshwater fish fauna?

(2013) Luiz HG Pereira et al.   BMC GENETICS

Species Detection and Identification in Sexual Organisms Using Population Genetic Theory and DNA Sequences

(2013) C. William Birky   PLoS One

A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System

(2013) Sujeevan Ratnasingham et al.   PLoS One

Delimiting Species Using Single-Locus Data and the Generalized Mixed Yule Coalescent Approach: A Revised Method and Evaluation on Simulated Data Sets

(2013) Tomochika Fujisawa et al.   SYSTEMATIC BIOLOGY

Phylogeny and biogeography of highly diverged freshwater fish species (Leuciscinae, Cyprinidae, Teleostei) inferred from mitochondrial genome analysis

(2012) Junichi M. Imoto et al.   GENE

Barcoding Atlantic Canada's commonly encountered marine fishes

(2012) M. R. McCusker et al.   Molecular Ecology Resources

Single-locus species delimitation: a test of the mixed Yule-coalescent model, with an empirical application to Philippine round-leaf bats

(2012) J. A. Esselstyn et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Quaternary phylogeography: the roots of hybrid zones

(2011) Godfrey M. Hewitt   GENETICA

Sequence divergence at mitochondrial genes in animals: Applicability of DNA data in genetics of speciation and molecular phylogenetics

(2011) Yuri Ph. Kartavtsev   Marine Genomics

Divergence atCyt-bandCo-1mtDNA genes on different taxonomic levels and genetics of speciation in animals

(2011) Yuri Ph. Kartavtsev   Mitochondrial DNA

Repeated Unidirectional Introgression of Nuclear and Mitochondrial DNA Between Four Congeneric Tanganyikan Cichlids

(2011) Bruno Nevado et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenetic analysis of Altai osmans of the genus Oreoleuciscus (Pisces, Cyprinidae, Leuciscinae), based on the analysis of the cytochrome oxidase 1 gene (Co-1) sequence

(2011) N. M. Batishcheva et al.   RUSSIAN JOURNAL OF GENETICS

Evidence from mitochondrial genomics supports the lower Mesozoic of South Asia as the time and place of basal divergence of cypriniform fishes (Actinopterygii: Ostariophysi)

(2011) KENJI SAITOH et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Sequence diversity at cytochrome oxidase 1 (Co-1) gene among sculpins (Scorpaeniformes, Cottidae) and some other scorpionfish of Russia Far East with phylogenetic and taxonomic insights

(2010) Yuri Ph. Kartavtsev et al.   Genes & Genomics

Extensive hybridization and tetrapolyploidy in spined loach fish

(2010) Kenji Saitoh et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenetic and taxonomic analysis of flatfish species (Teleostei, Pleuronectiformes) inferred from the primary nucleotide sequence of cytochrome oxidase 1 gene (Co-1)

(2010) S. N. Sharina et al.   RUSSIAN JOURNAL OF GENETICS

Reticulate Evolution and Marine Organisms: The Final Frontier?

(2009) Michael Arnold et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

DNA barcoding of Pacific Canada’s fishes

(2009) Dirk Steinke et al.   MARINE BIOLOGY

Distant horizontal gene transfer is rare for multiple families of prokaryotic insertion sequences

(2008) Andreas Wagner et al.   MOLECULAR GENETICS AND GENOMICS

Reconstructing the phylogenetic relationships of the earth’s most diverse clade of freshwater fishes—order Cypriniformes (Actinopterygii: Ostariophysi): A case study using multiple nuclear loci and the mitochondrial genome

(2008) Richard L. Mayden et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION