Transcriptomic and metabolomic analyses of cucumber fruit peels reveal a developmental increase in terpenoid glycosides associated with age-related resistance to Phytophthora capsici

Evaluation of different training systems on Annurca apple fruits revealed by agronomical, qualitative and NMR-based metabolomic approaches

(2017) Brigida D'Abrosca et al.   FOOD CHEMISTRY

Effects of Development of Ontogenic Resistance in Strawberry Leaves Upon Pre- and Postgermination Growth and Sporulation of Podosphaera aphanis

(2016) Belachew Asalf et al.   PLANT DISEASE

Integrative Analyses of Nontargeted Volatile Profiling and Transcriptome Data Provide Molecular Insight into VOC Diversity in Cucumber Plants ( Cucumis sativus )

(2016) Guo Wei et al.   PLANT PHYSIOLOGY

Transcriptome and Small RNAome Dynamics during a Resistant and Susceptible Interaction between Cucumber and Downy Mildew

(2016) Alyssa Burkhardt et al.   Plant Genome

TCP transcription factors are critical for the coordinated regulation ofISOCHORISMATE SYNTHASE 1expression inArabidopsis thaliana

(2015) Xiaoyan Wang et al.   PLANT JOURNAL

Relative Mass Defect Filtering of Mass Spectra: A Path to Discovery of Plant Specialized Metabolites

(2015) E.A. Prabodha Ekanayaka et al.   PLANT PHYSIOLOGY

Development of Partial Ontogenic Resistance to Powdery Mildew in Hop Cones and Its Management Implications

(2015) Megan C. Twomey et al.   PLoS One

Plant innate immunity – sunny side up?

(2015) Simon Stael et al.   TRENDS IN PLANT SCIENCE

Exocarp Properties and Transcriptomic Analysis of Cucumber (Cucumis sativus) Fruit Expressing Age-Related Resistance to Phytophthora capsici

(2015) Kaori Ando et al.   PLoS One

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Growth–Defense Tradeoffs in Plants: A Balancing Act to Optimize Fitness

(2014) Bethany Huot et al.   Molecular Plant

Ontogenic Resistance of Leaves and Fruit, and How Leaf Folding Influences the Distribution of Powdery Mildew on Strawberry Plants Colonized byPodosphaera aphanis

(2014) Belachew Asalf et al.   PHYTOPATHOLOGY

Biosynthesis, regulation, and domestication of bitterness in cucumber

(2014) Y. Shang et al.   SCIENCE

MAPK Cascades in Plant Disease Resistance Signaling

(2013) Xiangzong Meng et al.   Annual Review of Phytopathology

Therapeutic and Nutraceutical Potential of Bioactive Compounds Extracted from Fruit Residues

(2013) Neha Babbar et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity

(2013) Jianjian Qi et al.   NATURE GENETICS

Overexpression of AtWRKY28 and AtWRKY75 in Arabidopsis enhances resistance to oxalic acid and Sclerotinia sclerotiorum

(2013) Xiaoting Chen et al.   PLANT CELL REPORTS

Plant chemical defense: at what cost?

(2013) Elizabeth H. Neilson et al.   TRENDS IN PLANT SCIENCE

Bifurcation of Arabidopsis NLR Immune Signaling via Ca2+-Dependent Protein Kinases

(2013) Xiquan Gao et al.   PLoS Pathogens

Transcriptome analyses of early cucumber fruit growth identifies distinct gene modules associated with phases of development

(2012) Kaori Ando et al.   BMC GENOMICS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Advances in Research onPhytophthora capsicion Vegetable Crops in The United States

(2012) Leah L. Granke et al.   PLANT DISEASE

RNA-Seq improves annotation of protein-coding genes in the cucumber genome

(2011) Zhen Li et al.   BMC GENOMICS

Variation in Herbivory-induced Volatiles Among Cucumber (Cucumis sativus L.) Varieties has Consequences for the Attraction of Carnivorous Natural Enemies

(2011) Iris F. Kappers et al.   JOURNAL OF CHEMICAL ECOLOGY

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Age-Related Resistance ofNicotiana benthamianaAgainst Hemibiotrophic PathogenPhytophthora infestansRequires Both Ethylene- and Salicylic Acid–Mediated Signaling Pathways

(2010) Yusuke Shibata et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Plant immunity: towards an integrated view of plant–pathogen interactions

(2010) Peter N. Dodds et al.   NATURE REVIEWS GENETICS

The biophysical design of plant cuticles: an overview

(2010) Eva Domínguez et al.   NEW PHYTOLOGIST

The genome of the cucumber, Cucumis sativus L.

(2009) Sanwen Huang et al.   NATURE GENETICS

Ripening-Regulated Susceptibility of Tomato Fruit to Botrytis cinerea Requires NOR But Not RIN or Ethylene

(2009) D. Cantu et al.   PLANT PHYSIOLOGY

Ontogenic Resistance to Uncinula necator Varies by Genotype and Tissue Type in a Diverse Collection of Vitis spp.

(2008) Christopher T. Gee et al.   PLANT DISEASE