Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism

Circadian regulation of hormone signaling and plant physiology

(2016) Hagop S. Atamian et al.   PLANT MOLECULAR BIOLOGY

Advanced Solvent Based Methods for Molecular Characterization of Soil Organic Matter by High-Resolution Mass Spectrometry

(2015) Malak M. Tfaily et al.   ANALYTICAL CHEMISTRY

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

(2015) Davide Bulgarelli et al.   Cell Host & Microbe

Effects of Diurnal Variation of Gut Microbes and High-Fat Feeding on Host Circadian Clock Function and Metabolism

(2015) Vanessa Leone et al.   Cell Host & Microbe

Evaluation of water sampling methodologies for amplicon-based characterization of bacterial community structure

(2015) Christopher Staley et al.   JOURNAL OF MICROBIOLOGICAL METHODS

MetaboAnalyst 3.0—making metabolomics more meaningful

(2015) Jianguo Xia et al.   NUCLEIC ACIDS RESEARCH

Carbon partitioning inArabidopsis thalianais a dynamic process controlled by the plants metabolic status and its circadian clock

(2015) Katharina Kölling et al.   PLANT CELL AND ENVIRONMENT

Rhythmicity of the intestinal microbiota is regulated by gender and the host circadian clock

(2015) Xue Liang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa

(2015) S. L. Lebeis et al.   SCIENCE

STRESSing the role of the plant circadian clock

(2015) Pil Joon Seo et al.   TRENDS IN PLANT SCIENCE

Transkingdom Control of Microbiota Diurnal Oscillations Promotes Metabolic Homeostasis

(2014) Christoph A. Thaiss et al.   CELL

Diet and Feeding Pattern Affect the Diurnal Dynamics of the Gut Microbiome

(2014) Amir Zarrinpar et al.   Cell Metabolism

A Generalized Kruskal-Wallis Test Incorporating Group Uncertainty with Application to Genetic Association Studies

(2013) Elif F. Acar et al.   BIOMETRICS

Homeostasis in Intestinal Epithelium Is Orchestrated by the Circadian Clock and Microbiota Cues Transduced by TLRs

(2013) Atish Mukherji et al.   CELL

Investigating dissolved organic matter decomposition in northern peatlands using complimentary analytical techniques

(2013) Malak M. Tfaily et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Arabidopsis Coordinates the Diurnal Regulation of Carbon Allocation and Growth across a Wide Range of Photoperiods

(2013) Ronan Sulpice et al.   Molecular Plant

Photosynthetic entrainment of the Arabidopsis thaliana circadian clock

(2013) Michael J. Haydon et al.   NATURE

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An overview of natural variation studies in the Arabidopsis thaliana circadian clock

(2013) Muhammad Usman Anwer et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Circadian clock-regulated physiological outputs: Dynamic responses in nature

(2013) Hannah A. Kinmonth-Schultz et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

The interactions between the circadian clock and primary metabolism

(2012) Eva M Farré et al.   CURRENT OPINION IN PLANT BIOLOGY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes

(2011) Thomas M. Gihring et al.   ENVIRONMENTAL MICROBIOLOGY

Degradation of natural organic matter: A thermodynamic analysis

(2011) Douglas E. LaRowe et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Circadian clocks and adaptation in Arabidopsis

(2011) SHAI YERUSHALMI et al.   MOLECULAR ECOLOGY

Characterization of dissolved organic matter in Lake Superior and its watershed using ultrahigh resolution mass spectrometry

(2011) Elizabeth C. Minor et al.   ORGANIC GEOCHEMISTRY

Circadian control of root elongation and C partitioning in Arabidopsis thaliana

(2011) NIMA YAZDANBAKHSH et al.   PLANT CELL AND ENVIRONMENT

Toward an Efficient Method of Identifying Core Genes for Evolutionary and Functional Microbial Phylogenies

(2011) Nicola Segata et al.   PLoS One

Similarities in the circadian clock and photoperiodism in plants

(2010) Young Hun Song et al.   CURRENT OPINION IN PLANT BIOLOGY

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

PhyloChip hybridization uncovered an enormous bacterial diversity in the rhizosphere of different potato cultivars: many common and few cultivar-dependent taxa

(2010) Nicole Weinert et al.   FEMS MICROBIOLOGY ECOLOGY

JTK_CYCLE: An Efficient Nonparametric Algorithm for Detecting Rhythmic Components in Genome-Scale Data Sets

(2010) Michael E. Hughes et al.   JOURNAL OF BIOLOGICAL RHYTHMS

Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions

(2010) Marcus J. Claesson et al.   NUCLEIC ACIDS RESEARCH

Circadian control of carbohydrate availability for growth in Arabidopsis plants at night

(2010) A. Graf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Circadian System in Higher Plants

(2009) Stacey L. Harmer   Annual Review of Plant Biology

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Lights, Rhythms, Infection: The Role of Light and the Circadian Clock in Determining the Outcome of Plant-Pathogen Interactions

(2009) L. C. Roden et al.   PLANT CELL

Next-Generation Communication

(2009) T. Bisseling et al.   SCIENCE

Phylogenetic beta diversity: linking ecological and evolutionary processes across space in time

(2008) Catherine H. Graham et al.   ECOLOGY LETTERS

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

SENSITIVE TO FREEZING6 Integrates Cellular and Environmental Inputs to the Plant Circadian Clock

(2008) H. Knight et al.   PLANT PHYSIOLOGY

Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1

(2008) R. A. Gutierrez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY