Draft genome of the honey bee ectoparasitic mite, Tropilaelaps mercedesae, is shaped by the parasitic life history

Genome Sequencing of the Phytoseiid Predatory MiteMetaseiulus occidentalisReveals Completely AtomizedHoxGenes and Superdynamic Intron Evolution

(2016) Marjorie A. Hoy et al.   Genome Biology and Evolution

The ectoparasitic mite Tropilaelaps mercedesae reduces western honey bee, Apismellifera , longevity and emergence weight, and promotes Deformed wing virus infections

(2016) Kitiphong Khongphinitbunjong et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

The Glutathione-S-Transferase, Cytochrome P450 and Carboxyl/Cholinesterase Gene Superfamilies in Predatory Mite Metaseiulus occidentalis

(2016) Ke Wu et al.   PLoS One

Genomic insights into the Ixodes scapularis tick vector of Lyme disease

(2016) Monika Gulia-Nuss et al.   Nature Communications

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Diversity in a honey bee pathogen: first report of a third master variant of the Deformed Wing Virus quasispecies

(2015) Gideon J Mordecai et al.   ISME Journal

The draft genome, transcriptome, and microbiome of Dermatophagoides farinae reveal a broad spectrum of dust mite allergens

(2015) Ting-Fung Chan et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Interactions ofTropilaelaps mercedesae, honey bee viruses and immune response inApis mellifera

(2015) Kitiphong Khongphinitbunjong et al.   JOURNAL OF APICULTURAL RESEARCH

Drosophila Ionotropic Receptor 25a mediates circadian clock resetting by temperature

(2015) Chenghao Chen et al.   NATURE

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Draft genome of the scabies mite

(2015) S. Dean Rider et al.   Parasites & Vectors

Symbiosis in an overlooked microcosm: a systematic review of the bacterial flora of mites

(2015) KITTIPONG CHAISIRI et al.   PARASITOLOGY

In-depth proteomic analysis of Varroa destructor: Detection of DWV-complex, ABPV, VdMLV and honeybee proteins in the mite

(2015) Tomas Erban et al.   Scientific Reports

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Finding the missing honey bee genes: lessons learned from a genome upgrade

(2014) Christine G Elsik et al.   BMC GENOMICS

OMIGA: Optimized Maker-Based Insect Genome Annotation

(2014) Jinding Liu et al.   MOLECULAR GENETICS AND GENOMICS

The complete mitochondrial genome of the scab mite Psoroptes cuniculi (Arthropoda: Arachnida) provides insights into Acari phylogeny

(2014) Xiao-Bin Gu et al.   Parasites & Vectors

The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

(2014) Ariel D. Chipman et al.   PLOS BIOLOGY

Infernal 1.1: 100-fold faster RNA homology searches

(2013) E. P. Nawrocki et al.   BIOINFORMATICS

Ionotropic Receptors (IRs): Chemosensory ionotropic glutamate receptors in Drosophila and beyond

(2013) Raphael Rytz et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

The ABC gene family in arthropods: Comparative genomics and role in insecticide transport and resistance

(2013) Wannes Dermauw et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genetic causes of convergent evolution

(2013) David L. Stern   NATURE REVIEWS GENETICS

Molecular and phylogenetic characterization of honey bee viruses,Nosemamicrosporidia, protozoan parasites, and parasitic mites in China

(2013) Bu Yang et al.   Ecology and Evolution

Recent Studies on Insect Hormone Metabolic Pathways Mediated by Cytochrome P450 Enzymes

(2012) Masatoshi Iga et al.   BIOLOGICAL & PHARMACEUTICAL BULLETIN

The oyster genome reveals stress adaptation and complexity of shell formation

(2012) Guofan Zhang et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Global Honey Bee Viral Landscape Altered by a Parasitic Mite

(2012) S. J. Martin et al.   SCIENCE

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

(2011) Guillaume Marçais et al.   BIOINFORMATICS

The genome of Tetranychus urticae reveals herbivorous pest adaptations

(2011) Miodrag Grbić et al.   NATURE

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Sperm proteasome and fertilization

(2011) Peter Sutovsky   REPRODUCTION

Bees brought to their knees: microbes affecting honey bee health

(2011) Jay D. Evans et al.   TRENDS IN MICROBIOLOGY

Function and evolution of sex determination mechanisms, genes and pathways in insects

(2010) Tanja Gempe et al.   BIOESSAYS

Genomic survey of the ectoparasitic mite Varroa destructor, a major pest of the honey bee Apis mellifera

(2010) Scott R Cornman et al.   BMC GENOMICS

The regulation of expression of insect cuticle protein genes

(2010) J.P. Charles   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Molecular phylogeny of acariform mites (Acari, Arachnida): Strong conflict between phylogenetic signal and long-branch attraction artifacts

(2010) Miroslawa Dabert et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

A Novel Obligate Intracellular Gamma-Proteobacterium Associated with Ixodid Ticks, Diplorickettsia massiliensis, Gen. Nov., Sp. Nov

(2010) Oleg Mediannikov et al.   PLoS One

Independent filtering increases detection power for high-throughput experiments

(2010) R. Bourgon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle

(2010) E. F. Kirkness et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Ancient Protostome Origin of Chemosensory Ionotropic Glutamate Receptors and the Evolution of Insect Taste and Olfaction

(2010) Vincent Croset et al.   PLoS Genetics

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Annotation and expression of carboxylesterases in the silkworm, Bombyx mori

(2009) Quan-You Yu et al.   BMC GENOMICS

The nuclear genome of the phytoseiid Metaseiulus occidentalis (Acari: Phytoseiidae) is among the smallest known in arthropods

(2009) Ayyamperumal Jeyaprakash et al.   EXPERIMENTAL AND APPLIED ACAROLOGY

Identification and characterization of a protostome homologue of peropsin from a jumping spider

(2009) Takashi Nagata et al.   JOURNAL OF COMPARATIVE PHYSIOLOGY A-NEUROETHOLOGY SENSORY NEURAL AND BEHAVIORAL PHYSIOLOGY

Deformed wing virus associated with Tropilaelaps mercedesae infesting European honey bees (Apis mellifera)

(2008) Eva Forsgren et al.   EXPERIMENTAL AND APPLIED ACAROLOGY

Whole genome-based assessment of the taxonomic position of the arthropod pathogenic bacterium Rickettsiella grylli

(2008) Andreas Leclerque   FEMS MICROBIOLOGY LETTERS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

The ectoparasitic mite Tropilaelaps mercedesae (Acari, Laelapidae) as a vector of honeybee viruses

(2008) B. Dainat et al.   INSECTES SOCIAUX

Kalign2: high-performance multiple alignment of protein and nucleotide sequences allowing external features

(2008) Timo Lassmann et al.   NUCLEIC ACIDS RESEARCH