Genome-Wide Association and Transcriptome Analyses Reveal Candidate Genes Underlying Yield-determining Traits in Brassica napus

Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

(2016) Xiaodong Wang et al.   BMC PLANT BIOLOGY

Transcriptomics-assisted quantitative trait locus fine mapping for the rapid identification of a nodulin 26-like intrinsic protein gene regulating boron efficiency in allotetraploid rapeseed

(2016) Yingpeng Hua et al.   PLANT CELL AND ENVIRONMENT

A genome-wide association study of plant height and primary branch number in rapeseed ( Brassica napus )

(2016) Feng Li et al.   PLANT SCIENCE

A genome-wide association study reveals novel elite allelic variations in seed oil content of Brassica napus

(2016) Sheng Liu et al.   THEORETICAL AND APPLIED GENETICS

Genetic dissection of plant architecture and yield-related traits in Brassica napus

(2016) Guangqin Cai et al.   Scientific Reports

A combination of genome-wide association and transcriptome analysis reveals candidate genes controlling harvest index-related traits in Brassica napus

(2016) Kun Lu et al.   Scientific Reports

Developmental Functions of miR156-Regulated SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) Genes in Arabidopsis thaliana

(2016) Mingli Xu et al.   PLoS Genetics

Characterizing Variation of Branch Angle and Genome-Wide Association Mapping in Rapeseed (Brassica napus L.)

(2016) Jia Liu et al.   Frontiers in Plant Science

Genome-Wide Identification of QTL for Seed Yield and Yield-Related Traits and Construction of a High-Density Consensus Map for QTL Comparison in Brassica napus

(2016) Weiguo Zhao et al.   Frontiers in Plant Science

A Genome-Wide Association Study Reveals New Loci for Resistance to Clubroot Disease in Brassica napus

(2016) Lixia Li et al.   Frontiers in Plant Science

Association Mapping of Flowering Time QTLs and Insight into Their Contributions to Rapeseed Growth Habits

(2016) Nian Wang et al.   Frontiers in Plant Science

Genome-wide Association Study Identifies New Loci for Resistance to Sclerotinia Stem Rot in Brassica napus

(2016) Jian Wu et al.   Frontiers in Plant Science

Agronomic and Seed Quality Traits Dissected by Genome-Wide Association Mapping in Brassica napus

(2016) Niklas Körber et al.   Frontiers in Plant Science

Genome-Wide Association Study Dissecting the Genetic Architecture Underlying the Branch Angle Trait in Rapeseed (Brassica napus L.)

(2016) Chengming Sun et al.   Scientific Reports

Unravelling the complex trait of harvest index in rapeseed (Brassica napus L.) with association mapping

(2015) Xiang Luo et al.   BMC GENOMICS

Diverse regulatory factors associate with flowering time and yield responses in winter-type Brassica napus

(2015) Sarah Schiessl et al.   BMC GENOMICS

Genome-wide association study reveals the genetic architecture of flowering time in rapeseed (Brassica napus L.)

(2015) Liping Xu et al.   DNA RESEARCH

Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

(2015) Zhengkui Zhou et al.   NATURE BIOTECHNOLOGY

Genome-wide association analysis and differential expression analysis of resistance toSclerotiniastem rot inBrassica napus

(2015) Lijuan Wei et al.   PLANT BIOTECHNOLOGY JOURNAL

The DYT1-interacting proteins bHLH010, bHLH089 and bHLH091 are redundantly required for Arabidopsis anther development and transcriptome

(2015) Engao Zhu et al.   PLANT JOURNAL

Natural variation inARF18gene simultaneously affects seed weight and silique length in polyploid rapeseed

(2015) Jing Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative quantitative trait loci for silique length and seed weight in Brassica napus

(2015) Ying Fu et al.   Scientific Reports

Linkage and regional association analysis reveal two new tightly-linked major-QTLs for pod number and seed number per pod in rapeseed (Brassica napus L.)

(2015) Jiaqin Shi et al.   Scientific Reports

Genome-Wide Survey and Expression Profile Analysis of the Mitogen-Activated Protein Kinase (MAPK) Gene Family in Brassica rapa

(2015) Kun Lu et al.   PLoS One

Functional Characterization of NAC and MYB Transcription Factors Involved in Regulation of Biomass Production in Switchgrass (Panicum virgatum)

(2015) Ruiqin Zhong et al.   PLoS One

Comparative Transcriptome Analysis of Recessive Male Sterility (RGMS) in Sterile and Fertile Brassica napus Lines

(2015) Cunmin Qu et al.   PLoS One

Systems genetics: From GWAS to disease pathways

(2014) Marijke R. van der Sijde et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Genome-Wide Association Study Dissects the Genetic Architecture of Seed Weight and Seed Quality in Rapeseed (Brassica napus L.)

(2014) F. Li et al.   DNA RESEARCH

ROP3 GTPase Contributes to Polar Auxin Transport and Auxin Responses and Is Important for Embryogenesis and Seedling Growth in Arabidopsis

(2014) J.-b. Huang et al.   PLANT CELL

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

(2014) B. Chalhoub et al.   SCIENCE

The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

(2014) Shengyi Liu et al.   Nature Communications

Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

(2014) Isobel AP Parkin et al.   GENOME BIOLOGY

Natural Variations and Genome-Wide Association Studies in Crop Plants

(2013) Xuehui Huang et al.   Annual Review of Plant Biology

Improvement of Sclerotinia sclerotiorum resistance in Brassica napus by using B. oleracea

(2013) Yijuan Ding et al.   GENETIC RESOURCES AND CROP EVOLUTION

In silico integration of quantitative trait loci for seed yield and yield-related traits in Brassica napus

(2013) Qing-Hong Zhou et al.   MOLECULAR BREEDING

Association mapping of six yield-related traits in rapeseed (Brassica napus L.)

(2013) Dongfang Cai et al.   THEORETICAL AND APPLIED GENETICS

Quantitative trait loci for seed yield and yield-related traits, and their responses to reduced phosphorus supply in Brassica napus

(2012) Guangda Ding et al.   ANNALS OF BOTANY

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Identification of a major QTL for silique length and seed weight in oilseed rape (Brassica napus L.)

(2012) Pu Yang et al.   THEORETICAL AND APPLIED GENETICS

Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasets

(2011) Miao-Xin Li et al.   HUMAN GENETICS

ggplot2: Elegant Graphics for Data Analysis

(2011) Cedric Ginestet   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES A-STATISTICS IN SOCIETY

The genome of the mesopolyploid crop species Brassica rapa

(2011) Xiaowu Wang et al.   NATURE GENETICS

Genome-wide association study of leaf architecture in the maize nested association mapping population

(2011) Feng Tian et al.   NATURE GENETICS

Quantitative trait loci mapping for two seed yield component traits in an oilseed rape (Brassica napus) cross

(2011) Wei Chen et al.   PLANT BREEDING

Genome-wide association studies coming of age in rice

(2010) Richard M Clark   NATURE GENETICS

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Detection of QTL for phosphorus efficiency at vegetative stage in Brassica napus

(2010) Mei Yang et al.   PLANT AND SOIL

Genetic and correlation analysis of silique-traits in Brassica napus L. by quantitative trait locus mapping

(2010) Liwu Zhang et al.   THEORETICAL AND APPLIED GENETICS

Mapping of quantitative trait loci and development of allele-specific markers for seed weight in Brassica napus

(2010) Chuchuan Fan et al.   THEORETICAL AND APPLIED GENETICS

Crop Yield Gaps: Their Importance, Magnitudes, and Causes

(2009) David B. Lobell et al.   Annual Review of Environment and Resources

Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies

(2009) Priya Duggal et al.   BMC GENOMICS

Co-location of seed oil content, seed hull content and seed coat color QTL in three different environments in Brassica napus L.

(2009) X. Y. Yan et al.   EUPHYTICA

Unraveling the Complex Trait of Crop Yield With Quantitative Trait Loci Mapping in Brassica napus

(2009) J. Shi et al.   GENETICS

MYB83 Is a Direct Target of SND1 and Acts Redundantly with MYB46 in the Regulation of Secondary Cell Wall Biosynthesis in Arabidopsis

(2009) R. L. McCarthy et al.   PLANT AND CELL PHYSIOLOGY

Genetic analysis of grain yield conditioned on its component traits in rice (Oryza sativa L.)

(2008) G. F. Liu et al.  

Genetic Analysis of Heterosis for Yield and Yield Components in Rapeseed (Brassica napus L.) by Quantitative Trait Locus Mapping

(2008) M. Radoev et al.   GENETICS

Progress and challenges in genome-wide association studies in humans

(2008) Peter Donnelly   NATURE