Genome-wide association analysis and differential expression analysis of resistance toSclerotiniastem rot inBrassica napus

Functional studies of transcription factors involved in plant defenses in the genomics era

(2015) Eunyoung Seo et al.   Briefings in Functional Genomics

Integration analysis of quantitative trait loci for resistance to Sclerotinia sclerotiorum in Brassica napus

(2015) Jiqiang Li et al.   EUPHYTICA

Resistance to a highly aggressive isolate ofSclerotinia sclerotiorumin aBrassica napusdiversity set

(2015) A. Taylor et al.   PLANT PATHOLOGY

Genome-Wide Distribution, Organisation and Functional Characterization of Disease Resistance and Defence Response Genes across Rice Species

(2015) Sangeeta Singh et al.   PLoS One

Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

(2015) Jennifer Spindel et al.   PLoS Genetics

Transcriptomic Profiling of Arabidopsis thaliana Mutant pad2.1 in Response to Combined Cold and Osmotic Stress

(2015) Deepak Kumar et al.   PLoS One

Homoeologous duplicated regions are involved in quantitative resistance of Brassica napus to stem canker

(2014) Berline Fopa Fomeju et al.   BMC GENOMICS

Genome-wide association study of blast resistance in indica rice

(2014) Caihong Wang et al.   BMC PLANT BIOLOGY

Genome-Wide Association Study Dissects the Genetic Architecture of Seed Weight and Seed Quality in Rapeseed (Brassica napus L.)

(2014) F. Li et al.   DNA RESEARCH

Associative Transcriptomics Study Dissects the Genetic Architecture of Seed Glucosinolate Content in Brassica napus

(2014) G. Lu et al.   DNA RESEARCH

Identification of glutathione S-transferase genes responding to pathogen infestation in Populus tomentosa

(2014) Weihua Liao et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

A Foundation for Provitamin A Biofortification of Maize: Genome-Wide Association and Genomic Prediction Models of Carotenoid Levels

(2014) Brenda F. Owens et al.   GENETICS

Identification and functional analysis of mitogen-activated protein kinase kinase kinase (MAPKKK) genes in canola (Brassica napus L.)

(2014) Yun Sun et al.   JOURNAL OF EXPERIMENTAL BOTANY

Quantitative trait loci analyses for resistance to Sclerotinia sclerotiorum and flowering time in Brassica napus

(2014) Dayong Wei et al.   MOLECULAR BREEDING

Genome-wide association mapping of tan spot resistance (Pyrenophora tritici-repentis) in European winter wheat

(2014) Sonja Kollers et al.   MOLECULAR BREEDING

Overexpression ofBnWRKY33in oilseed rape enhances resistance toSclerotinia sclerotiorum

(2014) Zheng Wang et al.   MOLECULAR PLANT PATHOLOGY

Improving the Accuracy of Whole Genome Prediction for Complex Traits Using the Results of Genome Wide Association Studies

(2014) Zhe Zhang et al.   PLoS One

Association Analysis of Stem Rust Resistance in U.S. Winter Wheat

(2014) Dadong Zhang et al.   PLoS One

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

(2014) B. Chalhoub et al.   SCIENCE

The role of the secondary cell wall in plant resistance to pathogens

(2014) Eva Miedes et al.   Frontiers in Plant Science

Identification and analysis of MKK and MPK gene families in canola (Brassica napus L.)

(2013) Wanwan Liang et al.   BMC GENOMICS

Glutathione and plant response to the biotic environment

(2013) Pierre Frendo et al.   FREE RADICAL BIOLOGY AND MEDICINE

Genome-wide association studies and prediction of 17 traits related to phenology, biomass and cell wall composition in the energy grassMiscanthus sinensis

(2013) Gancho T. Slavov et al.   NEW PHYTOLOGIST

Potential of genomic selection in rapeseed (Brassica napusL.) breeding

(2013) Tobias Würschum et al.   PLANT BREEDING

Overexpression of AtWRKY28 and AtWRKY75 in Arabidopsis enhances resistance to oxalic acid and Sclerotinia sclerotiorum

(2013) Xiaoting Chen et al.   PLANT CELL REPORTS

OsTZF1, a CCCH-Tandem Zinc Finger Protein, Confers Delayed Senescence and Stress Tolerance in Rice by Regulating Stress-Related Genes

(2013) A. Jan et al.   PLANT PHYSIOLOGY

Differentially Expressed Proteins and Associated Histological and Disease Progression Changes in Cotyledon Tissue of a Resistant and Susceptible Genotype of Brassica napus Infected with Sclerotinia sclerotiorum

(2013) Harsh Garg et al.   PLoS One

Identification of QTLs for Resistance to Sclerotinia Stem Rot and BnaC.IGMT5.a as a Candidate Gene of the Major Resistant QTL SRC6 in Brassica napus

(2013) Jian Wu et al.   PLoS One

WRKY8 transcription factor functions in the TMV-cg defense response by mediating both abscisic acid and ethylene signaling in Arabidopsis

(2013) L. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Association mapping of six yield-related traits in rapeseed (Brassica napus L.)

(2013) Dongfang Cai et al.   THEORETICAL AND APPLIED GENETICS

Overexpression of cotton (Gossypium hirsutum) dirigent1 gene enhances lignification that blocks the spread of Verticillium dahliae

(2012) Haiyan Shi et al.   ACTA BIOCHIMICA ET BIOPHYSICA SINICA

Plant Immunity to Necrotrophs

(2012) Tesfaye Mengiste   Annual Review of Phytopathology

Association mapping in sunflower for sclerotinia head rot resistance

(2012) Corina M Fusari et al.   BMC PLANT BIOLOGY

Screening resistance against Sclerotinia sclerotiorum in Brassica crops with use of detached stem assay under controlled environment

(2012) Jiaqin Mei et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Sulfur Fertilization and Fungal Infections Affect the Exchange of H2S and COS from Agricultural Crops

(2012) Elke Bloem et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Plant disease resistance genes: Current status and future directions

(2012) Mayank Anand Gururani et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

Regulation of basal and oxidative stress-triggered jasmonic acid-related gene expression by glutathione

(2012) YI HAN et al.   PLANT CELL AND ENVIRONMENT

Genome-wide association study (GWAS) of resistance to head smut in maize

(2012) Ming Wang et al.   PLANT SCIENCE

Identification of genomic regions involved in resistance against Sclerotinia sclerotiorum from wild Brassica oleracea

(2012) Jiaqin Mei et al.   THEORETICAL AND APPLIED GENETICS

Identification of Ug99 stem rust resistance loci in winter wheat germplasm using genome-wide association analysis

(2012) Long-Xi Yu et al.   THEORETICAL AND APPLIED GENETICS

Lignin metabolism has a central role in the resistance of cotton to the wilt fungus Verticillium dahliae as revealed by RNA-Seq-dependent transcriptional analysis and histochemistry

(2011) Li Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Arabidopsis Heterotrimeric G-protein Regulates Cell Wall Defense and Resistance to Necrotrophic Fungi

(2011) Magdalena Delgado-Cerezo et al.   Molecular Plant

Ethylene-Responsive Element-Binding Factor 5, ERF5, Is Involved in Chitin-Induced Innate Immunity Response

(2011) Geon Hui Son et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population

(2011) Kristen L Kump et al.   NATURE GENETICS

Defense to Sclerotinia sclerotiorum in oilseed rape is associated with the sequential activations of salicylic acid signaling and jasmonic acid signaling

(2011) Zheng Wang et al.   PLANT SCIENCE

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

The infection processes of Sclerotinia sclerotiorum in cotyledon tissue of a resistant and a susceptible genotype of Brassica napus

(2010) Harsh Garg et al.   ANNALS OF BOTANY

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

Performance of Single Nucleotide Polymorphisms versus Haplotypes for Genome-Wide Association Analysis in Barley

(2010) Aaron J. Lorenz et al.   PLoS One

Identification and expression analysis of WRKY transcription factor genes in canola (Brassica napus L.) in response to fungal pathogens and hormone treatments

(2009) Bo Yang et al.   BMC PLANT BIOLOGY

Mapping of QTLs detected in a Brassica napus DH population for resistance to Sclerotinia sclerotiorum in multiple environments

(2009) Xiangrui Yin et al.   EUPHYTICA

Pathogenicity of morphologically different isolates of Sclerotinia sclerotiorum with Brassica napus and B. juncea genotypes

(2009) Harsh Garg et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Genome-wide analysis of Carica papaya reveals a small NBS resistance gene family

(2009) Brad W. Porter et al.   MOLECULAR GENETICS AND GENOMICS

Patterns of differential gene expression inBrassica napuscultivars infected withSclerotinia sclerotiorum

(2009) JIANWEI ZHAO et al.   MOLECULAR PLANT PATHOLOGY

Lignin engineering

(2008) R VANHOLME et al.   CURRENT OPINION IN PLANT BIOLOGY

Next-generation genetics in plants

(2008) Magnus Nordborg et al.   NATURE

β-Glucosidases as detonators of plant chemical defense

(2008) Anne Vinther Morant et al.   PHYTOCHEMISTRY

Genome-wide identification of NBS resistance genes in Populus trichocarpa

(2008) Annegret Kohler et al.   PLANT MOLECULAR BIOLOGY

Functional characterization of Arabidopsis NaCl-inducible WRKY25 and WRKY33 transcription factors in abiotic stresses

(2008) Yuanqing Jiang et al.   PLANT MOLECULAR BIOLOGY