Transcriptomics-assisted quantitative trait locus fine mapping for the rapid identification of a nodulin 26-like intrinsic protein gene regulating boron efficiency in allotetraploid rapeseed

Genome-wide SNP identification and QTL mapping for black rot resistance in cabbage

(2015) Jonghoon Lee et al.   BMC PLANT BIOLOGY

Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea

(2015) S. Das et al.   DNA RESEARCH

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

The EMBL-EBI bioinformatics web and programmatic tools framework

(2015) Weizhong Li et al.   NUCLEIC ACIDS RESEARCH

Dwarf and tiller-enhancing 1 regulates growth and development by influencing boron uptake in boron limited conditions in rice

(2015) Kai Liu et al.   PLANT SCIENCE

Rapid and reliable identification of tomato fruit weight and locule number loci by QTL-seq

(2015) Eudald Illa-Berenguer et al.   THEORETICAL AND APPLIED GENETICS

Transport of Boron by thetassel-less1Aquaporin Is Critical for Vegetative and Reproductive Development in Maize

(2014) Amanda R. Durbak et al.   PLANT CELL

The Boron Efflux Transporter ROTTEN EAR Is Required for Maize Inflorescence Development and Fertility

(2014) Mithu Chatterjee et al.   PLANT CELL

OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions

(2014) Hideki Hanaoka et al.   PLANT JOURNAL

A High-Density Genetic Map Identifies a Novel Major QTL for Boron Efficiency in Oilseed Rape (Brassica napus L.)

(2014) Didi Zhang et al.   PLoS One

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

(2014) B. Chalhoub et al.   SCIENCE

QTL-seq identifies an early flowering QTL located near Flowering Locus T in cucumber

(2014) Hongfeng Lu et al.   THEORETICAL AND APPLIED GENETICS

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Characteristics of root boron nutrition confer high boron efficiency in Brassica napus cultivars

(2013) Lu Yang et al.   PLANT AND SOIL

Spatio-Temporal Transcript Profiling of Rice Roots and Shoots in Response to Phosphate Starvation and Recovery

(2013) D. Secco et al.   PLANT CELL

QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations

(2013) Hiroki Takagi et al.   PLANT JOURNAL

Roles of BOR2, a Boron Exporter, in Cross Linking of Rhamnogalacturonan II and Root Elongation under Boron Limitation in Arabidopsis

(2013) K. Miwa et al.   PLANT PHYSIOLOGY

High-density genotyping: an overkill for QTL mapping? Lessons learned from a case study in maize and simulations

(2013) Michael Stange et al.   THEORETICAL AND APPLIED GENETICS

A Sequential Quantitative Trait Locus Fine-Mapping Strategy Using Recombinant-Derived ProgenyF

(2012) Qin Yang et al.   Journal of Integrative Plant Biology

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Dissecting Quantitative Trait Loci for Boron Efficiency across Multiple Environments in Brassica napus

(2012) Zunkang Zhao et al.   PLoS One

Expression of theArabidopsisBorate Efflux Transporter Gene,AtBOR4, in Rice Affects the Xylem Loading of Boron and Tolerance to Excess Boron

(2011) Masataka KAJIKAWA et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Identification of genes associated with nitrogen-use efficiency by genome-wide transcriptional analysis of two soybean genotypes

(2011) Qing N Hao et al.   BMC GENOMICS

BRAD, the genetics and genomics database for Brassica plants

(2011) Feng Cheng et al.   BMC PLANT BIOLOGY

The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic

(2011) Namiki Mitani-Ueno et al.   JOURNAL OF EXPERIMENTAL BOTANY

Natural variation in GS5 plays an important role in regulating grain size and yield in rice

(2011) Yibo Li et al.   NATURE GENETICS

Boron-Dependent Degradation ofNIP5;1mRNA for Acclimation to Excess Boron Conditions inArabidopsis

(2011) Mayuki Tanaka et al.   PLANT CELL

Boron transport in plants: co-ordinated regulation of transporters

(2010) Kyoko Miwa et al.   ANNALS OF BOTANY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Boron deficiency in maize

(2010) Sittichai Lordkaew et al.   PLANT AND SOIL

3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer

(2009) Yan W Asmann et al.   BMC GENOMICS

High-throughput genotyping by whole-genome resequencing

(2009) X. Huang et al.   GENOME RESEARCH

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

A molecular modeling approach defines a new group of Nodulin 26-like aquaporins in plants

(2008) Pierre Rougé et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Mapping and validation of chromosome regions conferring a new boron-efficient locus in Brassica napus

(2008) Hua Zhao et al.   MOLECULAR BREEDING

NIP6;1 Is a Boric Acid Channel for Preferential Transport of Boron to Growing Shoot Tissues in Arabidopsis

(2008) M. Tanaka et al.   PLANT CELL