Identification of Putative Transmembrane Proteins Involved in Salinity Tolerance in Chenopodium quinoa by Integrating Physiological Data, RNAseq, and SNP Analyses

The genome of Chenopodium quinoa

(2017) David E. Jarvis et al.   NATURE

Salt tolerance of spinach as related to seasonal climate

(2016) S. Ors et al.   HORTICULTURAL SCIENCE

Salares versus coastal ecotypes of quinoa: Salinity responses in Chilean landraces from contrasting habitats

(2016) Karina B. Ruiz et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Comparative transcriptome analysis within the Lolium/Festuca species complex reveals high sequence conservation

(2015) Adrian Czaban et al.   BMC GENOMICS

Transcriptome-enabled marker discovery and mapping of plastochron-related genes in Petunia spp.

(2015) Yufang Guo et al.   BMC GENOMICS

FunRich: An open access standalone functional enrichment and interaction network analysis tool

(2015) Mohashin Pathan et al.   PROTEOMICS

Comparing salt tolerance of beet cultivars and their halophytic ancestor: consequences of domestication and breeding programmes

(2015) Jelte Rozema et al.   AoB Plants

Salinity tolerance in plants. Quantitative approach to ion transport starting from halophytes and stepping to genetic and protein engineering for manipulating ion fluxes

(2015) Vadim Volkov   Frontiers in Plant Science

A novel workflow correlating RNA-seq data to Phythophthora infestans resistance levels in wild Solanum species and potato clones

(2015) Itziar Frades et al.   Frontiers in Plant Science

RNA-Seq Analysis of the Response of the Halophyte, Mesembryanthemum crystallinum (Ice Plant) to High Salinity

(2015) Hironaka Tsukagoshi et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Salt resistant crop plants

(2014) Stuart J Roy et al.   CURRENT OPINION IN BIOTECHNOLOGY

Economics of salt-induced land degradation and restoration

(2014) M. Qadir et al.   NATURAL RESOURCES FORUM

Plant salt-tolerance mechanisms

(2014) Ulrich Deinlein et al.   TRENDS IN PLANT SCIENCE

CYP709B3, a cytochrome P450 monooxygenase gene involved in salt tolerance in Arabidopsis thaliana

(2013) Guohong Mao et al.   BMC PLANT BIOLOGY

Sulfate availability affects ABA levels and germination response to ABA and salt stress inArabidopsis thaliana

(2013) Min-Jie Cao et al.   PLANT JOURNAL

Protocol: optimising hydroponic growth systems for nutritional and physiological analysis of Arabidopsis thaliana and other plants

(2013) Simon J Conn et al.   Plant Methods

Effect of salt stress on growth and physiology in amaranth and lettuce: Implications for bioregenerative life support system

(2012) Lifeng Qin et al.   ADVANCES IN SPACE RESEARCH

BamView: visualizing and interpretation of next-generation sequencing read alignments

(2012) T. Carver et al.   BRIEFINGS IN BIOINFORMATICS

Salt tolerance mechanisms in quinoa (Chenopodium quinoa Willd.)

(2012) Verena Isabelle Adolf et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Varietal differences of quinoa’s tolerance to saline conditions

(2012) Verena I. Adolf et al.   PLANT AND SOIL

Ion Exchangers NHX1 and NHX2 Mediate Active Potassium Uptake into Vacuoles to Regulate Cell Turgor and Stomatal Function in Arabidopsis

(2012) V. Barragan et al.   PLANT CELL

A novel protein kinase involved in Na+exclusion revealed from positional cloning

(2012) S. J. ROY et al.   PLANT CELL AND ENVIRONMENT

Reduced expression of a gene encoding a Golgi localized monosaccharide transporter (OsGMST1) confers hypersensitivity to salt in rice (Oryza sativa)

(2011) Hong Cao et al.   JOURNAL OF EXPERIMENTAL BOTANY

TheArabidopsisNa+/H+Antiporters NHX1 and NHX2 Control Vacuolar pH and K+Homeostasis to Regulate Growth, Flower Development, and Reproduction

(2011) Elias Bassil et al.   PLANT CELL

Variation in salinity tolerance of four lowland genotypes of quinoa (Chenopodium quinoa Willd.) as assessed by growth, physiological traits, and sodium transporter gene expression

(2011) Karina Ruiz-Carrasco et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

SHORT COMMUNICATION: Effect of Salt Stress on Peruvian Germplasm of Chenopodium quinoa Willd.: A Promising Crop

(2010) L. R. Gómez-Pando et al.   JOURNAL OF AGRONOMY AND CROP SCIENCE

Sulphate as a xylem-borne chemical signal precedes the expression of ABA biosynthetic genes in maize roots

(2010) L. Ernst et al.   JOURNAL OF EXPERIMENTAL BOTANY

Ionic and osmotic relations in quinoa (Chenopodium quinoa Willd.) plants grown at various salinity levels

(2010) Y. Hariadi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Breeding Technologies to Increase Crop Production in a Changing World

(2010) M. Tester et al.   SCIENCE

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

CNV-seq, a new method to detect copy number variation using high-throughput sequencing

(2009) Chao Xie et al.   BMC BIOINFORMATICS

GEOCHEM-EZ: a chemical speciation program with greater power and flexibility

(2009) Jon E. Shaff et al.   PLANT AND SOIL

The AtNHX1 exchanger mediates potassium compartmentation in vacuoles of transgenic tomato

(2009) Eduardo O. Leidi et al.   PLANT JOURNAL

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

The cyclic nucleotide-gated channel, AtCNGC10, influences salt tolerance inArabidopsis

(2008) Kun-Mei Guo et al.   PHYSIOLOGIA PLANTARUM

Potassium transport and plant salt tolerance

(2008) Sergey Shabala et al.   PHYSIOLOGIA PLANTARUM