Nuclear microenvironments modulate transcription from low-affinity enhancers
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Title
Nuclear microenvironments modulate transcription from low-affinity enhancers
Authors
Keywords
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Journal
eLife
Volume 6, Issue -, Pages -
Publisher
eLife Sciences Organisation, Ltd.
Online
2017-11-02
DOI
10.7554/elife.28975
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- (2016) Alistair N. Boettiger et al. NATURE
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- (2016) Paul W Tillberg et al. NATURE BIOTECHNOLOGY
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- (2016) Justin Crocker et al. NATURE GENETICS
- Syntax compensates for poor binding sites to encode tissue specificity of developmental enhancers
- (2016) Emma K. Farley et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2016) Barbora Antosova et al. PLoS Genetics
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- (2016) David S Lorberbaum et al. eLife
- RNA Polymerase II cluster dynamics predict mRNA output in living cells
- (2016) Won-Ki Cho et al. eLife
- A dynamic mode of mitotic bookmarking by transcription factors
- (2016) Sheila S Teves et al. eLife
- Low Affinity Binding Site Clusters Confer Hox Specificity and Regulatory Robustness
- (2015) Justin Crocker et al. CELL
- The ImageJ ecosystem: An open platform for biomedical image analysis
- (2015) Johannes Schindelin et al. MOLECULAR REPRODUCTION AND DEVELOPMENT
- Single-base pair differences in a shared motif determine differential Rhodopsin expression
- (2015) J. Rister et al. SCIENCE
- Suboptimization of developmental enhancers
- (2015) E. K. Farley et al. SCIENCE
- Probing the target search of DNA-binding proteins in mammalian cells using TetR as model searcher
- (2015) Davide Normanno et al. Nature Communications
- Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
- (2014) Jiji Chen et al. CELL
- Single-molecule analysis of transcription factor binding at transcription sites in live cells
- (2014) Tatsuya Morisaki et al. Nature Communications
- Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci
- (2014) Daan Noordermeer et al. eLife
- Single-molecule tracking in live cells reveals distinct target-search strategies of transcription factors in the nucleus
- (2014) Ignacio Izeddin et al. eLife
- 3D imaging of Sox2 enhancer clusters in embryonic stem cells
- (2014) Zhe Liu et al. eLife
- Topology of mammalian developmental enhancers and their regulatory landscapes
- (2013) Wouter de Laat et al. NATURE
- Single-molecule imaging of transcription factor binding to DNA in live mammalian cells
- (2013) J Christof M Gebhardt et al. NATURE METHODS
- TALE-mediated modulation of transcriptional enhancers in vivo
- (2013) Justin Crocker et al. NATURE METHODS
- Superresolution by image scanning microscopy using pixel reassignment
- (2013) Colin J. R. Sheppard et al. OPTICS LETTERS
- Low-affinity transcription factor binding sites shape morphogen responses and enhancer evolution
- (2013) A. I. Ramos et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Real-Time Dynamics of RNA Polymerase II Clustering in Live Human Cells
- (2013) I. I. Cisse et al. SCIENCE
- A Transcription Factor Collective Defines Cardiac Cell Fate and Reflects Lineage History
- (2012) Guillaume Junion et al. CELL
- Fiji: an open-source platform for biological-image analysis
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- Transcription factors: from enhancer binding to developmental control
- (2012) François Spitz et al. NATURE REVIEWS GENETICS
- Sequence-dependent sliding kinetics of p53
- (2012) J. S. Leith et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Dynamic Exchange at Regulatory Elements during Chromatin Remodeling Underlies Assisted Loading Mechanism
- (2011) Ty C. Voss et al. CELL
- Cofactor Binding Evokes Latent Differences in DNA Binding Specificity between Hox Proteins
- (2011) Matthew Slattery et al. CELL
- Genome-Wide Analysis of the Binding of the Hox Protein Ultrabithorax and the Hox Cofactor Homothorax in Drosophila
- (2011) Siew Woh Choo et al. PLoS One
- Genome-Wide Tissue-Specific Occupancy of the Hox Protein Ultrabithorax and Hox Cofactor Homothorax in Drosophila
- (2011) Matthew Slattery et al. PLoS One
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- (2011) K. M. Lelli et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A high-level 3D visualization API for Java and ImageJ
- (2010) Benjamin Schmid et al. BMC BIOINFORMATICS
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- (2010) S. Rowan et al. GENES & DEVELOPMENT
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- High Local Concentration: A Fundamental Strategy of Life
- (2009) Stefan Oehler et al. JOURNAL OF MOLECULAR BIOLOGY
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- (2009) John E Dueber et al. NATURE BIOTECHNOLOGY
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