Temporal network analysis identifies early physiological and transcriptomic indicators of mild drought in Brassica rapa

Endogenous circadian rhythms in pigment composition induce changes in photochemical efficiency in plant canopies

(2017) José Ignacio García-Plazaola et al.   PLANT CELL AND ENVIRONMENT

Dead or Alive? Using Membrane Failure and Chlorophyll a Fluorescence to Predict Plant Mortality from Drought

(2017) Carmela R. Guadagno et al.   PLANT PHYSIOLOGY

Parallel analysis ofArabidopsiscircadian clock mutants reveals different scales of transcriptome and proteome regulation

(2017) Alexander Graf et al.   Open Biology

Distinct transcriptome responses to water limitation in isohydric and anisohydric grapevine cultivars

(2016) Silvia Dal Santo et al.   BMC GENOMICS

Genotypic variation in biomass allocation in response to field drought has a greater affect on yield than gas exchange or phenology

(2016) Christine E. Edwards et al.   BMC PLANT BIOLOGY

Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought

(2016) Marieke Dubois et al.   PLANT CELL AND ENVIRONMENT

Daytime soybean transcriptome fluctuations during water deficit stress

(2015) Fabiana Aparecida Rodrigues et al.   BMC GENOMICS

Transcriptional networks — crops, clocks, and abiotic stress

(2015) Malia A Gehan et al.   CURRENT OPINION IN PLANT BIOLOGY

Growth and physiological responses of isohydric and anisohydric poplars to drought

(2015) Ziv Attia et al.   JOURNAL OF EXPERIMENTAL BOTANY

Integrating circadian dynamics with physiological processes in plants

(2015) Kathleen Greenham et al.   NATURE REVIEWS GENETICS

Selection during crop diversification involves correlated evolution of the circadian clock and ecophysiological traits in Brassica rapa

(2015) Yulia Yarkhunova et al.   NEW PHYTOLOGIST

Inference of Longevity-Related Genes from a Robust Coexpression Network of Seed Maturation Identifies Regulators Linking Seed Storability to Biotic Defense-Related Pathways

(2015) Karima Righetti et al.   PLANT CELL

Automated phenotyping of plant shoots using imaging methods for analysis of plant stress responses – a review

(2015) Jan F Humplík et al.   Plant Methods

The Responses of ArabidopsisEarly Light-Induced Protein2to Ultraviolet B, High Light, and Cold Stress Are Regulated by a Transcriptional Regulatory Unit Composed of Two Elements

(2015) Natsuki Hayami et al.   PLANT PHYSIOLOGY

FastRFunctions for Robust Correlations and Hierarchical Clustering

(2015) Peter Langfelder et al.   Journal of Statistical Software

The Theoretical Limit to Plant Productivity

(2014) Evan H. DeLucia et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The variability of stomatal sensitivity to leaf water potential across tree species indicates a continuum between isohydric and anisohydric behaviours

(2014) Tamir Klein   FUNCTIONAL ECOLOGY

Genotype-dependent influence of night-time vapour pressure deficit on night-time transpiration and daytime gas exchange in wheat

(2014) R�my Schoppach et al.   FUNCTIONAL PLANT BIOLOGY

Genotype–environment interactions affecting preflowering physiological and morphological traits ofBrassica rapagrown in two watering regimes

(2014) Mohamed El-Soda et al.   JOURNAL OF EXPERIMENTAL BOTANY

Phloem transport and drought

(2014) S. Sevanto   JOURNAL OF EXPERIMENTAL BOTANY

A new look at water transport regulation in plants

(2014) Jordi Martínez-Vilalta et al.   NEW PHYTOLOGIST

Nitrite Transport Activity of a Novel HPP Family Protein Conserved in Cyanobacteria and Chloroplasts

(2014) Shin-ichi Maeda et al.   PLANT AND CELL PHYSIOLOGY

Analysis of Global Gene Expression in Brachypodium distachyon Reveals Extensive Network Plasticity in Response to Abiotic Stress

(2014) Henry D. Priest et al.   PLoS One

The Physiological Importance of Glucosinolates on Plant Response to Abiotic Stress in Brassica

(2013) María del Carmen Martínez-Ballesta et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Nitrogen regulation of transpiration controls mass-flow acquisition of nutrients

(2013) Ignatious Matimati et al.   JOURNAL OF EXPERIMENTAL BOTANY

Chlorophyll fluorescence analysis: a guide to good practice and understanding some new applications

(2013) E.H. Murchie et al.   JOURNAL OF EXPERIMENTAL BOTANY

Modelled hydraulic redistribution by sunflower (Helianthus annuus L.) matches observed data only after including night-time transpiration

(2013) REBECCA B. NEUMANN et al.   PLANT CELL AND ENVIRONMENT

Abscisic Acid Mediates a Divergence in the Drought Response of Two Conifers

(2013) T. J. Brodribb et al.   PLANT PHYSIOLOGY

Proteomics and Metabolomics of Arabidopsis Responses to Perturbation of Glucosinolate Biosynthesis

(2012) Ya-zhou Chen et al.   Molecular Plant

Quantitative Variation in Water-Use Efficiency across Water Regimes and Its Relationship with Circadian, Vegetative, Reproductive, and Leaf Gas-Exchange Traits

(2012) Christine E. Edwards et al.   Molecular Plant

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Identification of Gene Modules Associated with Drought Response in Rice by Network-Based Analysis

(2012) Lida Zhang et al.   PLoS One

Carbon dynamics in trees: feast or famine?

(2012) A. Sala et al.   TREE PHYSIOLOGY

Linking definitions, mechanisms, and modeling of drought-induced tree death

(2012) William R.L. Anderegg et al.   TRENDS IN PLANT SCIENCE

Phenotyping for drought tolerance of crops in the genomics era

(2012) Roberto Tuberosa   Frontiers in Physiology

The genome of the mesopolyploid crop species Brassica rapa

(2011) Xiaowu Wang et al.   NATURE GENETICS

Network Quantitative Trait Loci Mapping of Circadian Clock Outputs Identifies Metabolic Pathway-to-Clock Linkages inArabidopsis

(2011) Rachel E. Kerwin et al.   PLANT CELL

Mechanisms Linking Drought, Hydraulics, Carbon Metabolism, and Vegetation Mortality

(2011) N. G. McDowell   PLANT PHYSIOLOGY

A Low-Cost Library Construction Protocol and Data Analysis Pipeline for Illumina-Based Strand-Specific Multiplex RNA-Seq

(2011) Lin Wang et al.   PLoS One

Is My Network Module Preserved and Reproducible?

(2011) Peter Langfelder et al.   PLoS Computational Biology

JTK_CYCLE: An Efficient Nonparametric Algorithm for Detecting Rhythmic Components in Genome-Scale Data Sets

(2010) Michael E. Hughes et al.   JOURNAL OF BIOLOGICAL RHYTHMS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Time of day shapes Arabidopsis drought transcriptomes

(2010) Olivia Wilkins et al.   PLANT JOURNAL

Molecular and Physiological Analysis of Drought Stress in Arabidopsis Reveals Early Responses Leading to Acclimation in Plant Growth

(2010) A. Harb et al.   PLANT PHYSIOLOGY

Differential expression of heat shock protein genes in preconditioning for photosynthetic acclimation in water-stressed loblolly pine

(2010) Cecilia Vásquez-Robinet et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Effective use of water (EUW) and not water-use efficiency (WUE) is the target of crop yield improvement under drought stress

(2009) A. Blum   FIELD CROPS RESEARCH

Does night-time transpiration contribute to anisohydric behaviour in a Vitis vinifera cultivar?

(2009) S. Y. Rogiers et al.   JOURNAL OF EXPERIMENTAL BOTANY

Decoupling the influence of leaf and root hydraulic conductances on stomatal conductance and its sensitivity to vapour pressure deficit as soil dries in a drained loblolly pine plantation

(2009) JEAN-CHRISTOPHE DOMEC et al.   PLANT CELL AND ENVIRONMENT

Genotype and time of day shape thePopulusdrought response

(2009) Olivia Wilkins et al.   PLANT JOURNAL

A Raf-Like MAPKKK Gene DSM1 Mediates Drought Resistance through Reactive Oxygen Species Scavenging in Rice

(2009) J. Ning et al.   PLANT PHYSIOLOGY

Photosynthesis under drought and salt stress: regulation mechanisms from whole plant to cell

(2008) M. M. Chaves et al.   ANNALS OF BOTANY

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Carbon isotopes and water use efficiency: sense and sensitivity

(2008) Ulli Seibt et al.   OECOLOGIA

Activated Expression of an Arabidopsis HD-START Protein Confers Drought Tolerance with Improved Root System and Reduced Stomatal Density

(2008) H. Yu et al.   PLANT CELL

Expression profiling of rice cultivars differing in their tolerance to long-term drought stress

(2008) Thomas Degenkolbe et al.   PLANT MOLECULAR BIOLOGY

Hydraulic Failure Defines the Recovery and Point of Death in Water-Stressed Conifers

(2008) T. J. Brodribb et al.   PLANT PHYSIOLOGY

Network Discovery Pipeline Elucidates Conserved Time-of-Day–Specific cis-Regulatory Modules

(2008) Todd P. Michael et al.   PLoS Genetics

Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development

(2008) Michael F Covington et al.   GENOME BIOLOGY