rRNA and rDNA based assessment of sea ice protist biodiversity from the central Arctic Ocean

Patterns of Rare and Abundant Marine Microbial Eukaryotes

(2014) Ramiro Logares et al.   CURRENT BIOLOGY

Distinct bacterial assemblages reside at different depths in Arctic multiyear sea ice

(2014) Ido Hatam et al.   FEMS MICROBIOLOGY ECOLOGY

Evaluating the potential of 18S rDNA clone libraries to complement pyrosequencing data of marine protists with near full-length sequence information

(2014) Christian Wolf et al.   Marine Biology Research

Composition, Buoyancy Regulation and Fate of Ice Algal Aggregates in the Central Arctic Ocean

(2014) Mar Fernández-Méndez et al.   PLoS One

A molecular survey of protist diversity through the central Arctic Ocean

(2014) Estelle Kilias et al.   POLAR BIOLOGY

Sea Ice Ecosystems

(2013) Kevin R. Arrigo   Annual Review of Marine Science

Active and total prokaryotic communities in dryland soils

(2013) Roey Angel et al.   FEMS MICROBIOLOGY ECOLOGY

Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses

(2013) Steven J Blazewicz et al.   ISME Journal

High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences

(2013) Kevin L Vergin et al.   ISME Journal

Mesoscale distribution and functional diversity of picoeukaryotes in the first-year sea ice of the Canadian Arctic

(2013) Kasia Piwosz et al.   ISME Journal

Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms

(2013) L. Kermarrec et al.   Molecular Ecology Resources

The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

(2013) Pelin Yilmaz et al.   NUCLEIC ACIDS RESEARCH

Assessing the Consequences of Denoising Marker-Based Metagenomic Data

(2013) John M. Gaspar et al.   PLoS One

Extremely High Copy Numbers and Polymorphisms of the rDNA Operon Estimated from Single Cell Analysis of Oligotrich and Peritrich Ciliates

(2013) Jun Gong et al.   PROTIST

Role of sea ice in global biogeochemical cycles: emerging views and challenges

(2013) Martin Vancoppenolle et al.   QUATERNARY SCIENCE REVIEWS

Export of Algal Biomass from the Melting Arctic Sea Ice

(2013) A. Boetius et al.   SCIENCE

Phylogenetic Clustering of Soil Microbial Communities by 16S rRNA but Not 16S rRNA Genes

(2012) Kristen M. DeAngelis et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative Analysis of Eukaryotic Marine Microbial Assemblages from 18S rRNA Gene and Gene Transcript Clone Libraries by Using Different Methods of Extraction

(2012) Amy Koid et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparison of RNA- and DNA-based bacterial communities in a lab-scale methane-degrading biocover

(2012) Tae Gwan Kim et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Distribution and Diversity of a Protist Predator Cryothecomonas (Cercozoa) in Arctic Marine Waters

(2012) Mary Thaler et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Protists in Arctic drift and land-fast sea ice

(2012) André M. Comeau et al.   JOURNAL OF PHYCOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Sequencing our way towards understanding global eukaryotic biodiversity

(2012) Holly M. Bik et al.   TRENDS IN ECOLOGY & EVOLUTION

Pyrosequencing analysis of the protist communities in a High Arctic meromictic lake: DNA preservation and change

(2012) Sophie Charvet et al.   Frontiers in Microbiology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

The Arctic’s rapidly shrinking sea ice cover: a research synthesis

(2011) Julienne C. Stroeve et al.   CLIMATIC CHANGE

Distribution and trends in Arctic sea ice age through spring 2011

(2011) James Maslanik et al.   GEOPHYSICAL RESEARCH LETTERS

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

(2011) Petr Baldrian et al.   ISME Journal

Development and validation of a one-dimensional snow-ice algae model against observations in Resolute Passage, Canadian Arctic Archipelago

(2011) L. Pogson et al.   JOURNAL OF GEOPHYSICAL RESEARCH

The Changing Arctic Sea Ice Cover

(2011) Donald Perovich   OCEANOGRAPHY

Future Arctic Ocean Seasonal Ice Zones and Implications for Pelagic-Benthic Coupling

(2011) Paul Wassmann et al.   OCEANOGRAPHY

Characteristics of two distinct high-light acclimated algal communities during advanced stages of sea ice melt

(2011) C. J. Mundy et al.   POLAR BIOLOGY

Comparison of wintertime eukaryotic community from sea ice and open water in the Baltic Sea, based on sequencing of the 18S rRNA gene

(2011) Markus Majaneva et al.   POLAR BIOLOGY

Protist assemblages in winter sea ice: setting the stage for the spring ice algal bloom

(2011) Andrea Niemi et al.   POLAR BIOLOGY

Diversity and Vertical Distribution of Microbial Eukaryotes in the Snow, Sea Ice and Seawater Near the North Pole at the End of the Polar Night

(2011) Charles Bachy et al.   Frontiers in Microbiology

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

(2010) Frederick A Matsen et al.   BMC BIOINFORMATICS

Characterization of halotolerant Bicosoecida and Placididea (Stramenopila) that are distinct from marine forms, and the phylogenetic pattern of salinity preference in heterotrophic stramenopiles

(2010) Jong Soo Park et al.   ENVIRONMENTAL MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Identification of diatom isolates from the Gulf of Gdańsk: testing of species identifications using morphology, 18S rDNA sequencing and DNA barcodes of strains from the Culture Collection of Baltic Algae (CCBA)

(2010) Filip Pniewski et al.   OCEANOLOGICAL AND HYDROBIOLOGICAL STUDIES

Dormancy contributes to the maintenance of microbial diversity

(2010) S. E. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The pan-Arctic biodiversity of marine pelagic and sea-ice unicellular eukaryotes: a first-attempt assessment

(2010) Michel Poulin et al.   Marine Biodiversity

Effect of environmental variables on eukaryotic microbial community structure of land-fast Arctic sea ice

(2009) Brian Eddie et al.   ENVIRONMENTAL MICROBIOLOGY

Decline in Arctic sea ice thickness from submarine and ICESat records: 1958-2008

(2009) R. Kwok et al.   GEOPHYSICAL RESEARCH LETTERS

New Insights into the Diversity of Marine Picoeukaryotes

(2009) Fabrice Not et al.   PLoS One

Quantification of Diatom and Dinoflagellate Biomasses in Coastal Marine Seawater Samples by Real-Time PCR

(2008) A. Godhe et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unveiling new microbial eukaryotes in the surface ocean

(2008) Ramon Massana et al.   CURRENT OPINION IN MICROBIOLOGY

PCR-Based Diversity Estimates of Artificial and Environmental 18S rRNA Gene Libraries

(2008) MARIANNE POTVIN et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Sea ice remote sensing using AMSR-E 89-GHz channels

(2008) G. Spreen et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Winter–spring dynamics in sea-ice carbon cycling in the coastal Arctic Ocean

(2008) Andrea Riedel et al.   JOURNAL OF MARINE SYSTEMS