An empirically driven data reduction method on the human 450K methylation array to remove tissue specific non-variable CpGs

Validation of a DNA methylation microarray for 850,000 CpG sites of the human genome enriched in enhancer sequences

(2016) Sebastian Moran et al.   Epigenomics

Tobacco smoking differently influences cell types of the innate and adaptive immune system—indications from CpG site methylation

(2016) Mario Bauer et al.   Clinical Epigenetics

Power and sample size estimation for epigenome-wide association scans to detect differential DNA methylation

(2015) Pei-Chien Tsai et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Life-course socioeconomic status and DNA methylation of genes regulating inflammation

(2015) Silvia Stringhini et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Methylation QTLs in the developing brain and their enrichment in schizophrenia risk loci

(2015) Eilis Hannon et al.   NATURE NEUROSCIENCE

Concordant and discordant DNA methylation signatures of aging in human blood and brain

(2015) Pau Farré et al.   Epigenetics & Chromatin

Long-range epigenetic regulation is conferred by genetic variation located at thousands of independent loci

(2015) Mathieu Lemire et al.   Nature Communications

The effect of smoking on DNA methylation of peripheral blood mononuclear cells from African American women

(2014) Meeshanthini V Dogan et al.   BMC GENOMICS

Meta-analysis of human methylomes reveals stably methylated sequences surrounding CpG islands associated with high gene expression

(2014) Rachel Edgar et al.   Epigenetics & Chromatin

Epigenome-wide profiling identifies significant differences in DNA methylation between matched-pairs of T- and B-lymphocytes from healthy individuals

(2013) John R Glossop et al.   Epigenetics

Recommendations for the design and analysis of epigenome-wide association studies

(2013) Karin B Michels et al.   NATURE METHODS

Changes in DNA methylation at the aryl hydrocarbon receptor repressor may be a new biomarker for smoking

(2013) Robert A Philibert et al.   Clinical Epigenetics

DNA methylation age of human tissues and cell types

(2013) Steve Horvath   GENOME BIOLOGY

Coordinated changes in AHRR methylation in lymphoblasts and pulmonary macrophages from smokers

(2012) Martha M. Monick et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS

A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data

(2012) Andrew E. Teschendorff et al.   BIOINFORMATICS

DNA methylation arrays as surrogate measures of cell mixture distribution

(2012) Eugene Houseman et al.   BMC BIOINFORMATICS

Quantitative, genome-wide analysis of the DNA methylome in sporadic pituitary adenomas

(2012) Cuong V Duong et al.   ENDOCRINE-RELATED CANCER

Epigenome-wide association study in the European Prospective Investigation into Cancer and Nutrition (EPIC-Turin) identifies novel genetic loci associated with smoking

(2012) Natalie S. Shenker et al.   HUMAN MOLECULAR GENETICS

Factors underlying variable DNA methylation in a human community cohort

(2012) L. L. Lam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative, high-resolution epigenetic profiling of CpG loci identifies associations with cord blood plasma homocysteine and birth weight in humans

(2011) Anthony A. Fryer et al.   Epigenetics

High density DNA methylation array with single CpG site resolution

(2011) Marina Bibikova et al.   GENOMICS

Increased methylation variation in epigenetic domains across cancer types

(2011) Kasper Daniel Hansen et al.   NATURE GENETICS

Identification of Type 1 Diabetes–Associated DNA Methylation Variable Positions That Precede Disease Diagnosis

(2011) Vardhman K. Rakyan et al.   PLoS Genetics

A statistical method for excluding non-variable CpG sites in high-throughput DNA methylation profiling

(2010) Hailong Meng et al.   BMC BIOINFORMATICS

Independent filtering increases detection power for high-throughput experiments

(2010) R. Bourgon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epigenetic profiling of somatic tissues from human autopsy specimens identifies tissue- and individual-specific DNA methylation patterns

(2009) Hyang-Min Byun et al.   HUMAN MOLECULAR GENETICS

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS