An empirically driven data reduction method on the human 450K methylation array to remove tissue specific non-variable CpGs
出版年份 2017 全文链接
标题
An empirically driven data reduction method on the human 450K methylation array to remove tissue specific non-variable CpGs
作者
关键词
Non-variable, 450K, Tissue, Filter, Power, Multiple-test correction, DNA methylation, Dimensionality reduction
出版物
Clinical Epigenetics
Volume 9, Issue 1, Pages -
出版商
Springer Nature
发表日期
2017-02-02
DOI
10.1186/s13148-017-0320-z
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Validation of a DNA methylation microarray for 850,000 CpG sites of the human genome enriched in enhancer sequences
- (2016) Sebastian Moran et al. Epigenomics
- Tobacco smoking differently influences cell types of the innate and adaptive immune system—indications from CpG site methylation
- (2016) Mario Bauer et al. Clinical Epigenetics
- Power and sample size estimation for epigenome-wide association scans to detect differential DNA methylation
- (2015) Pei-Chien Tsai et al. INTERNATIONAL JOURNAL OF EPIDEMIOLOGY
- Life-course socioeconomic status and DNA methylation of genes regulating inflammation
- (2015) Silvia Stringhini et al. INTERNATIONAL JOURNAL OF EPIDEMIOLOGY
- Methylation QTLs in the developing brain and their enrichment in schizophrenia risk loci
- (2015) Eilis Hannon et al. NATURE NEUROSCIENCE
- Concordant and discordant DNA methylation signatures of aging in human blood and brain
- (2015) Pau Farré et al. Epigenetics & Chromatin
- Long-range epigenetic regulation is conferred by genetic variation located at thousands of independent loci
- (2015) Mathieu Lemire et al. Nature Communications
- The effect of smoking on DNA methylation of peripheral blood mononuclear cells from African American women
- (2014) Meeshanthini V Dogan et al. BMC GENOMICS
- Meta-analysis of human methylomes reveals stably methylated sequences surrounding CpG islands associated with high gene expression
- (2014) Rachel Edgar et al. Epigenetics & Chromatin
- Epigenome-wide profiling identifies significant differences in DNA methylation between matched-pairs of T- and B-lymphocytes from healthy individuals
- (2013) John R Glossop et al. Epigenetics
- Recommendations for the design and analysis of epigenome-wide association studies
- (2013) Karin B Michels et al. NATURE METHODS
- Changes in DNA methylation at the aryl hydrocarbon receptor repressor may be a new biomarker for smoking
- (2013) Robert A Philibert et al. Clinical Epigenetics
- DNA methylation age of human tissues and cell types
- (2013) Steve Horvath GENOME BIOLOGY
- Coordinated changes in AHRR methylation in lymphoblasts and pulmonary macrophages from smokers
- (2012) Martha M. Monick et al. AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS
- A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data
- (2012) Andrew E. Teschendorff et al. BIOINFORMATICS
- DNA methylation arrays as surrogate measures of cell mixture distribution
- (2012) Eugene Houseman et al. BMC BIOINFORMATICS
- Quantitative, genome-wide analysis of the DNA methylome in sporadic pituitary adenomas
- (2012) Cuong V Duong et al. ENDOCRINE-RELATED CANCER
- Epigenome-wide association study in the European Prospective Investigation into Cancer and Nutrition (EPIC-Turin) identifies novel genetic loci associated with smoking
- (2012) Natalie S. Shenker et al. HUMAN MOLECULAR GENETICS
- Factors underlying variable DNA methylation in a human community cohort
- (2012) L. L. Lam et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Quantitative, high-resolution epigenetic profiling of CpG loci identifies associations with cord blood plasma homocysteine and birth weight in humans
- (2011) Anthony A. Fryer et al. Epigenetics
- High density DNA methylation array with single CpG site resolution
- (2011) Marina Bibikova et al. GENOMICS
- Increased methylation variation in epigenetic domains across cancer types
- (2011) Kasper Daniel Hansen et al. NATURE GENETICS
- Identification of Type 1 Diabetes–Associated DNA Methylation Variable Positions That Precede Disease Diagnosis
- (2011) Vardhman K. Rakyan et al. PLoS Genetics
- A statistical method for excluding non-variable CpG sites in high-throughput DNA methylation profiling
- (2010) Hailong Meng et al. BMC BIOINFORMATICS
- Independent filtering increases detection power for high-throughput experiments
- (2010) R. Bourgon et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Epigenetic profiling of somatic tissues from human autopsy specimens identifies tissue- and individual-specific DNA methylation patterns
- (2009) Hyang-Min Byun et al. HUMAN MOLECULAR GENETICS
- WGCNA: an R package for weighted correlation network analysis
- (2008) Peter Langfelder et al. BMC BIOINFORMATICS
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now