Termination factor Rho: From the control of pervasive transcription to cell fate determination in Bacillus subtilis
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Termination factor Rho: From the control of pervasive transcription to cell fate determination in Bacillus subtilis
Authors
Keywords
Bacillus subtilis, Bacterial sporulation, Biofilms, Operons, Gene expression, DNA transcription, Transcriptional control, Transcriptional termination
Journal
PLoS Genetics
Volume 13, Issue 7, Pages e1006909
Publisher
Public Library of Science (PLoS)
Online
2017-07-20
DOI
10.1371/journal.pgen.1006909
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A bacterial global regulator forms a prion
- (2017) Andy H. Yuan et al. SCIENCE
- Depleting Mycobacterium tuberculosis of the transcription termination factor Rho causes pervasive transcription and rapid death
- (2017) Laure Botella et al. Nature Communications
- sRNA-Mediated Control of Transcription Termination in E. coli
- (2016) Nadezda Sedlyarova et al. CELL
- LncRNAs, lost in translation or licence to regulate?
- (2016) Alvaro de Andres-Pablo et al. CURRENT GENETICS
- Fresh layers of RNA-mediated regulation in Gram-positive bacteria
- (2016) Philippe Bouloc et al. CURRENT OPINION IN MICROBIOLOGY
- The complexity of bacterial transcriptomes
- (2016) D. Stazic et al. JOURNAL OF BIOTECHNOLOGY
- Transcription termination factor Rho: a hub linking diverse physiological processes in bacteria
- (2016) Aleksandra Grylak-Mielnicka et al. MICROBIOLOGY-SGM
- Expression of multipleBacillus subtilisgenes is controlled by decay ofslrAmRNA from Rho-dependent 3′ ends
- (2016) Bo Liu et al. NUCLEIC ACIDS RESEARCH
- Learning from the Leaders: Gene Regulation by the Transcription Termination Factor Rho
- (2016) Michelle A. Kriner et al. TRENDS IN BIOCHEMICAL SCIENCES
- Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions
- (2016) Ulrike Mäder et al. PLoS Genetics
- NusA-dependent transcription termination prevents misregulation of global gene expression
- (2016) Smarajit Mondal et al. Nature Microbiology
- Bacterial antisense RNAs are mainly the product of transcriptional noise
- (2016) V. Llorens-Rico et al. Science Advances
- Stochastic Switching of Cell Fate in Microbes
- (2015) Thomas M. Norman et al. Annual Review of Microbiology
- Quantitative characterization of gene regulation by Rho dependent transcription termination
- (2015) Razika Hussein et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Bacterial differentiation via gradual activation of global regulators
- (2015) Ákos T. Kovács CURRENT GENETICS
- CodY Regulates SigD Levels and Activity by Binding to Three Sites in thefla/cheOperon
- (2015) Qutaiba O. Ababneh et al. JOURNAL OF BACTERIOLOGY
- Motility, Chemotaxis and Aerotaxis Contribute to Competitiveness during Bacterial Pellicle Biofilm Development
- (2015) Theresa Hölscher et al. JOURNAL OF MOLECULAR BIOLOGY
- SubtiWiki 2.0—an integrated database for the model organismBacillus subtilis
- (2015) Raphael H. Michna et al. NUCLEIC ACIDS RESEARCH
- Sleeping Beauty and the Beast (of pervasive transcription)
- (2015) Domenico Libri RNA
- Variations in the non-coding transcriptome as a driver of inter-strain divergence and physiological adaptation in bacteria
- (2015) Matthias Kopf et al. Scientific Reports
- From Cell Differentiation to Cell Collectives: Bacillus subtilis Uses Division of Labor to Migrate
- (2015) Jordi van Gestel et al. PLOS BIOLOGY
- The Structure and Regulation of Flagella inBacillus subtilis
- (2014) Sampriti Mukherjee et al. Annual Review of Genetics
- Comparative transcriptomics of two environmentally relevant cyanobacteria reveals unexpected transcriptome diversity
- (2014) Karsten Voigt et al. ISME Journal
- FlgM Is Secreted by the Flagellar Export Apparatus in Bacillus subtilis
- (2014) Rebecca A. Calvo et al. JOURNAL OF BACTERIOLOGY
- RelA Inhibits Bacillus subtilis Motility and Chaining
- (2014) Qutaiba O. Ababneh et al. JOURNAL OF BACTERIOLOGY
- Comprehensive Absolute Quantification of the Cytosolic Proteome ofBacillus subtilisby Data Independent, Parallel Fragmentation in Liquid Chromatography/Mass Spectrometry (LC/MSE)
- (2014) Jan Muntel et al. MOLECULAR & CELLULAR PROTEOMICS
- Pervasive transcription: illuminating the dark matter of bacterial transcriptomes
- (2014) Joseph T. Wade et al. NATURE REVIEWS MICROBIOLOGY
- Pervasive Transcription of a Herpesvirus Genome Generates Functionally Important RNAs
- (2014) S. P. Canny et al. mBio
- Terminator still moving forward: expanding roles for Rho factor
- (2013) Marc Boudvillain et al. CURRENT OPINION IN MICROBIOLOGY
- The dark matter rises: the expanding world of regulatory RNAs
- (2013) Michael B. Clark et al. Essays in Biochemistry
- Respiration control of multicellularity in Bacillus subtilis by a complex of the cytochrome chain with a membrane-embedded histidine kinase
- (2013) I. Kolodkin-Gal et al. GENES & DEVELOPMENT
- Novel Modulators Controlling Entry into Sporulation in Bacillus subtilis
- (2013) S. Garti-Levi et al. JOURNAL OF BACTERIOLOGY
- The YmdB Phosphodiesterase Is a Global Regulator of Late Adaptive Responses in Bacillus subtilis
- (2013) C. Diethmaier et al. JOURNAL OF BACTERIOLOGY
- Expression of kinA and kinB of Bacillus subtilis, Necessary for Sporulation Initiation, Is under Positive Stringent Transcription Control
- (2013) S. Tojo et al. JOURNAL OF BACTERIOLOGY
- Sticking together: building a biofilm the Bacillus subtilis way
- (2013) Hera Vlamakis et al. NATURE REVIEWS MICROBIOLOGY
- RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts
- (2013) Sarah Geisler et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Structure and function of long noncoding RNAs in epigenetic regulation
- (2013) Tim R Mercer et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Bacillus subtilis RNase Y Activity In Vivo Analysed by Tiling Microarrays
- (2013) Soumaya Laalami et al. PLoS One
- Rho and NusG suppress pervasive antisense transcription in Escherichia coli
- (2012) J. M. Peters et al. GENES & DEVELOPMENT
- Molecular Characterization of the Flagellar Hook in Bacillus subtilis
- (2012) C. R. Courtney et al. JOURNAL OF BACTERIOLOGY
- SlrA/SinR/SlrR inhibits motility gene expression upstream of a hypersensitive and hysteretic switch at the level of σD in Bacillus subtilis
- (2012) Loralyn M. Cozy et al. MOLECULAR MICROBIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- The excludon: a new concept in bacterial antisense RNA-mediated gene regulation
- (2012) Nina Sesto et al. NATURE REVIEWS MICROBIOLOGY
- Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis
- (2012) P. Nicolas et al. SCIENCE
- Antisense Transcription Is Pervasive but Rarely Conserved in Enteric Bacteria
- (2012) R. Raghavan et al. mBio
- Pulsed Feedback Defers Cellular Differentiation
- (2012) Joe H. Levine et al. PLOS BIOLOGY
- Fitness Landscape Transformation through a Single Amino Acid Change in the Rho Terminator
- (2012) Peter L. Freddolino et al. PLoS Genetics
- Three Essential Ribonucleases—RNase Y, J1, and III—Control the Abundance of a Majority of Bacillus subtilis mRNAs
- (2012) Sylvain Durand et al. PLoS Genetics
- Cellular Decision Making and Biological Noise: From Microbes to Mammals
- (2011) Gábor Balázsi et al. CELL
- Target-Mediated Protection of Endogenous MicroRNAs in C. elegans
- (2011) Saibal Chatterjee et al. DEVELOPMENTAL CELL
- Evidence that metabolism and chromosome copy number control mutually exclusive cell fates inBacillus subtilis
- (2011) Yunrong Chai et al. EMBO JOURNAL
- Importance ofeps genes fromBacillus subtilis in biofilm formation and swarming
- (2011) K. Nagórska et al. JOURNAL OF APPLIED GENETICS
- A Novel Factor Controlling Bistability in Bacillus subtilis: the YmdB Protein Affects Flagellin Expression and Biofilm Formation
- (2011) C. Diethmaier et al. JOURNAL OF BACTERIOLOGY
- Tracing the Domestication of a Biofilm-Forming Bacterium
- (2011) A. L. McLoon et al. JOURNAL OF BACTERIOLOGY
- Just-in-Time Control of Spo0A Synthesis in Bacillus subtilis by Multiple Regulatory Mechanisms
- (2011) Arnaud Chastanet et al. JOURNAL OF BACTERIOLOGY
- Bacterial Transcription Terminators: The RNA 3′-End Chronicles
- (2011) Jason M. Peters et al. JOURNAL OF MOLECULAR BIOLOGY
- cis-Antisense RNA, Another Level of Gene Regulation in Bacteria
- (2011) J. Georg et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- DegU-phosphate activates expression of the anti-sigma factor FlgM in Bacillus subtilis
- (2011) Yi-Huang Hsueh et al. MOLECULAR MICROBIOLOGY
- An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms
- (2011) Diego Romero et al. MOLECULAR MICROBIOLOGY
- Swarming motility and the control of master regulators of flagellar biosynthesis
- (2011) Joyce E. Patrick et al. MOLECULAR MICROBIOLOGY
- Fluctuations in spo0A Transcription Control Rare Developmental Transitions in Bacillus subtilis
- (2011) Nicolas Mirouze et al. PLoS Genetics
- Bacterial Antisense RNAs: How Many Are There, and What Are They Doing?
- (2010) Maureen Kiley Thomason et al. Annual Review of Genetics
- An epigenetic switch governing daughter cell separation in Bacillus subtilis
- (2010) Y. Chai et al. GENES & DEVELOPMENT
- The Threshold Level of the Sensor Histidine Kinase KinA Governs Entry into Sporulation in Bacillus subtilis
- (2010) P. Eswaramoorthy et al. JOURNAL OF BACTERIOLOGY
- Heterochronic Phosphorelay Gene Expression as a Source of Heterogeneity in Bacillus subtilis Spore Formation
- (2010) I. G. de Jong et al. JOURNAL OF BACTERIOLOGY
- Spatial Regulation of Histidine Kinases Governing Biofilm Formation in Bacillus subtilis
- (2010) A. L. McLoon et al. JOURNAL OF BACTERIOLOGY
- Small subunits of RNA polymerase: localization, levels and implications for core enzyme composition
- (2010) G. P. Doherty et al. MICROBIOLOGY-SGM
- pBaSysBioII: an integrative plasmid generating gfp transcriptional fusions for high-throughput analysis of gene expression in Bacillus subtilis
- (2010) E. Botella et al. MICROBIOLOGY-SGM
- A regulatory RNA required for antitermination of biofilm and capsular polysaccharide operons in Bacillales
- (2010) Irnov Irnov et al. MOLECULAR MICROBIOLOGY
- An antisense RNA that governs the expression kinetics of a multifunctional virulence gene
- (2010) Eun-Jin Lee et al. MOLECULAR MICROBIOLOGY
- The primary transcriptome of the major human pathogen Helicobacter pylori
- (2010) Cynthia M. Sharma et al. NATURE
- Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation
- (2010) Onuma Chumsakul et al. NUCLEIC ACIDS RESEARCH
- Broadly heterogeneous activation of the master regulator for sporulation in Bacillus subtilis
- (2010) A. Chastanet et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Widespread Antisense Transcription in Escherichia coli
- (2010) J. E. Dornenburg et al. mBio
- The EpsE Flagellar Clutch Is Bifunctional and Synergizes with EPS Biosynthesis to Promote Bacillus subtilis Biofilm Formation
- (2010) Sarah B. Guttenplan et al. PLoS Genetics
- Pervasive transcription constitutes a new level of eukaryotic genome regulation
- (2009) Julia Berretta et al. EMBO REPORTS
- A mechanism for cell cycle regulation of sporulation initiation in Bacillus subtilis
- (2009) J.-W. Veening et al. GENES & DEVELOPMENT
- Paracrine signaling in a bacterium
- (2009) D. Lopez et al. GENES & DEVELOPMENT
- Laboratory Strains of Bacillus subtilis Do Not Exhibit Swarming Motility
- (2009) J. E. Patrick et al. JOURNAL OF BACTERIOLOGY
- Cannibalism enhances biofilm development inBacillus subtilis
- (2009) Daniel López et al. MOLECULAR MICROBIOLOGY
- Paralogous antirepressors acting on the master regulator for biofilm formation inBacillus subtilis
- (2009) Yunrong Chai et al. MOLECULAR MICROBIOLOGY
- Enzymatic assembly of DNA molecules up to several hundred kilobases
- (2009) Daniel G Gibson et al. NATURE METHODS
- Bistability, Epigenetics, and Bet-Hedging in Bacteria
- (2008) Jan-Willem Veening et al. Annual Review of Microbiology
- A unified approach to false discovery rate estimation
- (2008) Korbinian Strimmer BMC BIOINFORMATICS
- The Origins of 168, W23, and Other Bacillus subtilis Legacy Strains
- (2008) D. R. Zeigler et al. JOURNAL OF BACTERIOLOGY
- A novel regulatory protein governing biofilm formation in Bacillus subtilis
- (2008) Frances Chu et al. MOLECULAR MICROBIOLOGY
- SlrR/SlrA controls the initiation of biofilm formation inBacillus subtilis
- (2008) Kazuo Kobayashi MOLECULAR MICROBIOLOGY
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- A new family of aspartyl phosphate phosphatases targeting the sporulation transcription factor Spo0A of Bacillus subtilis
- (2003) Marta Perego MOLECULAR MICROBIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started