Stochastic assembly produces heterogeneous communities in the Caenorhabditis elegans intestine

Assembly of the Caenorhabditis elegans gut microbiota from diverse soil microbial environments

(2016) Maureen Berg et al.   ISME Journal

Caenorhabditis elegansresponses to bacteria from its natural habitats

(2016) Buck S. Samuel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Host Gut Motility Promotes Competitive Exclusion within a Model Intestinal Microbiota

(2016) Travis J Wiles et al.   PLOS BIOLOGY

Vertebrate Hosts as Islands: Dynamics of Selection, Immigration, Loss, Persistence, and Potential Function of Bacteria on Salamander Skin

(2016) Andrew H. Loudon et al.   Frontiers in Microbiology

The Integral Role of Genetic Variation in the Evolution of Outcrossing in the Caenorhabditis elegans-Serratia marcescens Host-Parasite System

(2016) Raymond C. Parrish et al.   PLoS One

Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development

(2015) Adam R Burns et al.   ISME Journal

Sequence tag–based analysis of microbial population dynamics

(2015) Sören Abel et al.   NATURE METHODS

Application of a Neutral Community Model To Assess Structuring of the Human Lung Microbiome

(2015) Arvind Venkataraman et al.   mBio

Analysis of Bottlenecks in Experimental Models of Infection

(2015) Sören Abel et al.   PLoS Pathogens

Interspecies Systems Biology Uncovers Metabolites Affecting C. elegans Gene Expression and Life History Traits

(2014) Emma Watson et al.   CELL

Spatial Ecology of Bacteria at the Microscale in Soil

(2014) Xavier Raynaud et al.   PLoS One

Worms, bacteria, and micronutrients: an elegant model of our diet

(2014) Lutfu Safak Yilmaz et al.   TRENDS IN GENETICS

Spatial and Temporal Features of the Growth of a Bacterial Species Colonizing the Zebrafish Gut

(2014) Matthew Jemielita et al.   mBio

Commensals, probiotics and pathogens in theCaenorhabditis elegansmodel

(2013) Laura C. Clark et al.   CELLULAR MICROBIOLOGY

Stochastic changes over time and not founder effects drive cage effects in microbial community assembly in a mouse model

(2013) Jonathan McCafferty et al.   ISME Journal

The Long-Term Stability of the Human Gut Microbiota

(2013) J. J. Faith et al.   SCIENCE

Control of intestinal bacterial proliferation in regulation of lifespan in Caenorhabditis elegans

(2012) Cynthia Portal-Celhay et al.   BMC MICROBIOLOGY

Caenorhabditis elegans Immune Conditioning with the Probiotic Bacterium Lactobacillus acidophilus Strain NCFM Enhances Gram-Positive Immune Responses

(2012) Younghoon Kim et al.   INFECTION AND IMMUNITY

The Application of Ecological Theory Toward an Understanding of the Human Microbiome

(2012) E. K. Costello et al.   SCIENCE

Development of the Human Gastrointestinal Microbiota and Insights From High-Throughput Sequencing

(2011) Maria Gloria Dominguez-Bello et al.   GASTROENTEROLOGY

Competition and Resilience between Founder and Introduced Bacteria in the Caenorhabditis elegans Gut

(2011) Cynthia Portal-Celhay et al.   INFECTION AND IMMUNITY

Evidence for a core gut microbiota in the zebrafish

(2011) Guus Roeselers et al.   ISME Journal

Dietary Restriction of Caenorhabditis elegans by Axenic Culture Reflects Nutritional Requirement for Constituents Provided by Metabolically Active Microbes

(2011) I. Lenaerts et al.   JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES

Parallel bacterial evolution within multiple patients identifies candidate pathogenicity genes

(2011) Tami D Lieberman et al.   NATURE GENETICS

Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice

(2011) A. L. Goodman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Candida albicans Infection of Caenorhabditis elegans Induces Antifungal Immune Defenses

(2011) Read Pukkila-Worley et al.   PLoS Pathogens

Microbial Community Development in a Dynamic Gut Model Is Reproducible, Colon Region Specific, and Selective for Bacteroidetes and Clostridium Cluster IX

(2010) P. Van den Abbeele et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Acquisition, Evolution and Maintenance of the Normal Gut Microbiota

(2010) G.T. Macfarlane et al.   DIGESTIVE DISEASES

High-Throughput Screen for Novel Antimicrobials using a Whole Animal Infection Model

(2009) Terence I. Moy et al.   ACS Chemical Biology

Tissue-Specific Activities of an Immune Signaling Module Regulate Physiological Responses to Pathogenic and Nutritional Bacteria in C. elegans

(2009) Robert P. Shivers et al.   Cell Host & Microbe

Caenopores are antimicrobial peptides in the nematode Caenorhabditis elegans instrumental in nutrition and immunity

(2009) Thomas Roeder et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Caenorhabditis elegans Genomic Response to Soil Bacteria Predicts Environment-Specific Genetic Effects on Life History Traits

(2009) Joseph D. Coolon et al.   PLoS Genetics

Competing Isogenic Campylobacter Strains Exhibit Variable Population Structures In Vivo

(2008) C. Coward et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Modelling within-Host Spatiotemporal Dynamics of Invasive Bacterial Disease

(2008) Andrew J Grant et al.   PLOS BIOLOGY