Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development

Phylogenies support out-of-equilibrium models of biodiversity

(2015) Marc Manceau et al.   ECOLOGY LETTERS

A sampling formula for ecological communities with multiple dispersal syndromes

(2015) Thijs Janzen et al.   JOURNAL OF THEORETICAL BIOLOGY

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Application of a Neutral Community Model To Assess Structuring of the Human Lung Microbiome

(2015) Arvind Venkataraman et al.   mBio

Human Genetics Shape the Gut Microbiome

(2014) Julia K. Goodrich et al.   CELL

The gut microbiota — masters of host development and physiology

(2013) Felix Sommer et al.   NATURE REVIEWS MICROBIOLOGY

Context-Dependent Competition in a Model Gut Bacterial Community

(2013) Eric J. de Muinck et al.   PLoS One

Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules

(2013) R. Levy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mom Knows Best: The Universality of Maternal Microbial Transmission

(2013) Lisa J. Funkhouser et al.   PLOS BIOLOGY

Ecological drift and local exposures drive enteric bacterial community differences within species of Galápagos iguanas

(2012) EMILY W. LANKAU et al.   MOLECULAR ECOLOGY

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Bacterial Community Assembly and Turnover within the Intestines of Developing Zebrafish

(2012) Qingyun Yan et al.   PLoS One

Quantification of the relative roles of niche and neutral processes in structuring gastrointestinal microbiomes

(2012) P. Jeraldo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Application of Ecological Theory Toward an Understanding of the Human Microbiome

(2012) E. K. Costello et al.   SCIENCE

Phylogenetic Diversity Theory Sheds Light on the Structure of Microbial Communities

(2012) James P. O'Dwyer et al.   PLoS Computational Biology

Evidence for a core gut microbiota in the zebrafish

(2011) Guus Roeselers et al.   ISME Journal

Disentangling the importance of ecological niches from stochastic processes across scales

(2011) J. M. Chase et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

More closely related species are more ecologically similar in an experimental test

(2011) J. H. Burns et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Unified Neutral Theory of Biodiversity and Biogeography at Age Ten

(2011) James Rosindell et al.   TRENDS IN ECOLOGY & EVOLUTION

Why bacteria matter in animal development and evolution

(2010) Sebastian Fraune et al.   BIOESSAYS

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

From Structure to Function: the Ecology of Host-Associated Microbial Communities

(2010) C. J. Robinson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

(2010) A. K. Benson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Combined niche and neutral effects in a microbial wastewater treatment community

(2010) I. D. Ofiteru et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Succession of microbial consortia in the developing infant gut microbiome

(2010) J. E. Koenig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns

(2010) M. G. Dominguez-Bello et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An evaluation of R2 as an inadequate measure for nonlinear models in pharmacological and biochemical research: a Monte Carlo approach

(2010) Andrej-Nikolai Spiess et al.   BMC Pharmacology & Toxicology

Regional invariance among microbial communities

(2009) Örjan Östman et al.   ECOLOGY LETTERS

Bacterial Community Variation in Human Body Habitats Across Space and Time

(2009) E. K. Costello et al.   SCIENCE

Reconciling neutral community models and environmental filtering: theory and an empirical test

(2008) Franck Jabot et al.   OIKOS