Multiple viral infections in Agaricus bisporus - Characterisation of 18 unique RNA viruses and 8 ORFans identified by deep sequencing

Extensive horizontal gene transfers between plant pathogenic fungi

(2016) Huan Qiu et al.   BMC BIOLOGY

Functional analysis of Agaricus bisporus serine proteinase 1 reveals roles in utilization of humic rich substrates and adaptation to the leaf-litter ecological niche

(2016) Mary N. Heneghan et al.   ENVIRONMENTAL MICROBIOLOGY

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(2016)   MOLECULAR PLANT PATHOLOGY

Viral Agents Causing Brown Cap Mushroom Disease of Agaricus bisporus

(2015) Daniel Eastwood et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Brown mushroom symptom expression following infection of an Agaricus bisporus crop with MVX associated dsRNAs

(2015) Caoimhe Fleming-Archibald et al.   Fungal Biology

Diversity in a honey bee pathogen: first report of a third master variant of the Deformed Wing Virus quasispecies

(2015) Gideon J Mordecai et al.   ISME Journal

Superinfection exclusion and the long-term survival of honey bees in Varroa-infested colonies

(2015) Gideon J Mordecai et al.   ISME Journal

Finding balance: Virus populations reach equilibrium during the infection process

(2015) S.J. Harper et al.   VIROLOGY

Agaricus bisporus genome sequence: A commentary

(2013) Richard W. Kerrigan et al.   FUNGAL GENETICS AND BIOLOGY

Novel Virus Discovery and Genome Reconstruction from Field RNA Samples Reveals Highly Divergent Viruses in Dipteran Hosts

(2013) Shelley Cook et al.   PLoS One

Extracellular transmission of a DNA mycovirus and its use as a natural fungicide

(2013) Xiao Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prevalence and Diversity of Viruses in the Entomopathogenic Fungus Beauveria bassiana

(2012) Noemí Herrero et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Evolutionary genomics of mycovirus-related dsRNA viruses reveals cross-family horizontal gene transfer and evolution of diverse viral lineages

(2012) Huiquan Liu et al.   BMC EVOLUTIONARY BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

(2012) E. Morin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rate and influence of respiratory virus co-infection on pandemic (H1N1) influenza disease

(2011) Frank P. Esper et al.   JOURNAL OF INFECTION

Deep sequencing evidence from single grapevine plants reveals a virome dominated by mycoviruses

(2010) M. Al Rwahnih et al.   ARCHIVES OF VIROLOGY

Unfinished Stories on Viral Quasispecies and Darwinian Views of Evolution

(2010) Antonio Más et al.   JOURNAL OF MOLECULAR BIOLOGY

DotKnot: pseudoknot prediction using the probability dot plot under a refined energy model

(2010) Jana Sperschneider et al.   NUCLEIC ACIDS RESEARCH

Lifestyles of plant viruses

(2010) M. J. Roossinck   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Deep sequencing analysis of viruses infecting grapevines: Virome of a vineyard

(2010) Beatrix Coetzee et al.   VIROLOGY

Viruses of Plant Pathogenic Fungi

(2009) Said A. Ghabrial et al.   Annual Review of Phytopathology

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Hairpin-mediated down-regulation of the urea cycle enzyme argininosuccinate lyase in Agaricus bisporus

(2008) Daniel C. Eastwood et al.