RNA surveillance via nonsense-mediated mRNA decay is crucial for longevity in daf-2/insulin/IGF-1 mutant C. elegans

Long noncoding RNAs in aging and age-related diseases

(2016) Sukhleen Kour et al.   AGEING RESEARCH REVIEWS

RNA helicase SACY-1 is required for longevity caused by various genetic perturbations inCaenorhabditis elegans

(2016) Mihwa Seo et al.   CELL CYCLE

A Ribosomal Perspective on Proteostasis and Aging

(2016) Kristan K. Steffen et al.   Cell Metabolism

Food-derived sensory cues modulate longevity via distinct neuroendocrine insulin-like peptides

(2016) Murat Artan et al.   GENES & DEVELOPMENT

Splicing factor 1 modulates dietary restriction and TORC1 pathway longevity in C. elegans

(2016) Caroline Heintz et al.   NATURE

Chromatoid Body Protein TDRD6 Supports Long 3’ UTR Triggered Nonsense Mediated mRNA Decay

(2016) Grigorios Fanourgakis et al.   PLoS Genetics

Extracellular RNA in aging

(2016) Douglas F. Dluzen et al.   Wiley Interdisciplinary Reviews-RNA

Inhibition of elongin C promotes longevity and protein homeostasis via HIF-1 inC. elegans

(2015) Wooseon Hwang et al.   AGING CELL

SREBP and MDT-15 protectC. elegansfrom glucose-induced accelerated aging by preventing accumulation of saturated fat

(2015) Dongyeop Lee et al.   GENES & DEVELOPMENT

The C. elegans adult neuronal IIS/FOXO transcriptome reveals adult phenotype regulators

(2015) Rachel Kaletsky et al.   NATURE

RNA helicase HEL-1 promotes longevity by specifically activating DAF-16/FOXO transcription factor signaling inCaenorhabditis elegans

(2015) Mihwa Seo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA Damage, DNA Repair, Aging, and Neurodegeneration

(2015) Scott Maynard et al.   Cold Spring Harbor Perspectives in Medicine

spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data

(2014) Kristoffer Vitting-Seerup et al.   BMC BIOINFORMATICS

Somatic mutations, genome mosaicism, cancer and aging

(2014) Jan Vijg   CURRENT OPINION IN GENETICS & DEVELOPMENT

Regulation of Natural mRNAs by the Nonsense-Mediated mRNA Decay Pathway

(2014) Megan Peccarelli et al.   EUKARYOTIC CELL

Nonsense-mediated decay in genetic disease: Friend or foe?

(2014) Jake N. Miller et al.   MUTATION RESEARCH-REVIEWS IN MUTATION RESEARCH

DAF-16/FOXO and EGL-27/GATA promote developmental growth in response to persistent somatic DNA damage

(2014) Michael M. Mueller et al.   NATURE CELL BIOLOGY

Engineering of a conditional allele reveals multiple roles of XRN2 in Caenorhabditis elegans development and substrate specificity in microRNA turnover

(2014) Takashi S. Miki et al.   NUCLEIC ACIDS RESEARCH

IsoSCM: improved and alternative 3′ UTR annotation using multiple change-point inference

(2014) Sol Shenker et al.   RNA

MicroRNAs and the Genetic Network in Aging

(2013) Sachi Inukai et al.   JOURNAL OF MOLECULAR BIOLOGY

Insulin/IGF-1-mediated longevity is marked by reduced protein metabolism

(2013) G. J. Stout et al.   Molecular Systems Biology

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Genetic Characterization of smg-8 Mutants Reveals No Role in C. elegans Nonsense Mediated Decay

(2012) Jacqueline Rosains et al.   PLoS One

Regulation of nonsense-mediated mRNA decay

(2012) Lulu Huang et al.   Wiley Interdisciplinary Reviews-RNA

Nonsense-mediated mRNA decay (NMD) in animal embryogenesis: to die or not to die, that is the question

(2011) Jungwook Hwang et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

RNA Homeostasis Governed by Cell Type-Specific and Branched Feedback Loops Acting on NMD

(2011) Lulu Huang et al.   MOLECULAR CELL

OASIS: Online Application for the Survival Analysis of Lifespan Assays Performed in Aging Research

(2011) Jae-Seong Yang et al.   PLoS One

Improving RNA-Seq expression estimates by correcting for fragment bias

(2011) Adam Roberts et al.   GENOME BIOLOGY

Protein homeostasis and aging in neurodegeneration

(2010) Peter M. Douglas et al.   JOURNAL OF CELL BIOLOGY

The genetics of ageing

(2010) Cynthia J. Kenyon   NATURE

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegans

(2009) Arun K Ramani et al.   GENOME BIOLOGY

Comparison of nonsense-mediated mRNA decay efficiency in various murine tissues

(2008) Almoutassem B Zetoune et al.   BMC GENETICS

Selection and validation of a set of reliable reference genes for quantitative sod gene expression analysis in C. elegans

(2008) David Hoogewijs et al.   BMC MOLECULAR BIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Longevity and resistance to stress correlate with DNA repair capacity in Caenorhabditis elegans

(2008) Moonjung Hyun et al.   NUCLEIC ACIDS RESEARCH