Reconstructing 3D deformation dynamics for curved epithelial sheet morphogenesis from positional data of sparsely-labeled cells

Organoids as an in vitro model of human development and disease

(2016) Aliya Fatehullah et al.   NATURE CELL BIOLOGY

Quantitative analysis of tissue deformation dynamics reveals three characteristic growth modes and globally aligned anisotropic tissue deformation during chick limb development

(2015) Y. Morishita et al.   DEVELOPMENT

Patterned Anchorage to the Apical Extracellular Matrix Defines Tissue Shape in the Developing Appendages of Drosophila

(2015) Robert P. Ray et al.   DEVELOPMENTAL CELL

Local and tissue-scale forces drive oriented junction growth during tissue extension

(2015) Claudio Collinet et al.   NATURE CELL BIOLOGY

Myosin-II-mediated cell shape changes and cell intercalation contribute to primitive streak formation

(2015) Emil Rozbicki et al.   NATURE CELL BIOLOGY

Embryo-scale tissue mechanics during Drosophila gastrulation movements

(2015) Matteo Rauzi et al.   Nature Communications

Mechanical Coupling between Endoderm Invagination and Axis Extension in Drosophila

(2015) Claire M. Lye et al.   PLOS BIOLOGY

Interplay of cell dynamics and epithelial tension during morphogenesis of the Drosophila pupal wing

(2015) Raphaël Etournay et al.   eLife

Unified quantitative characterization of epithelial tissue development

(2015) Boris Guirao et al.   eLife

A benchmark for comparison of cell tracking algorithms

(2014) Martin Maška et al.   BIOINFORMATICS

Celsr1 is required for the generation of polarity at multiple levels of the mouse oviduct

(2014) D. Shi et al.   DEVELOPMENT

Bayesian inference of whole-organ deformation dynamics from limited space-time point data

(2014) Yoshihiro Morishita et al.   JOURNAL OF THEORETICAL BIOLOGY

Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data

(2014) Fernando Amat et al.   NATURE METHODS

Dynamic contacts: rearranging adherens junctions to drive epithelial remodelling

(2014) Masatoshi Takeichi   NATURE REVIEWS MOLECULAR CELL BIOLOGY

PCP and Septins Compartmentalize Cortical Actomyosin to Direct Collective Cell Movement

(2014) A. Shindo et al.   SCIENCE

Next-Generation Regenerative Medicine: Organogenesis from Stem Cells in 3D Culture

(2013) Yoshiki Sasai   Cell Stem Cell

Redefining the In Vivo Origin of Metanephric Nephron Progenitors Enables Generation of Complex Kidney Structures from Pluripotent Stem Cells

(2013) Atsuhiro Taguchi et al.   Cell Stem Cell

Eph/Ephrin signalling maintains eye field segregation from adjacent neural plate territories during forebrain morphogenesis

(2013) F. Cavodeassi et al.   DEVELOPMENT

The mechanical anisotropy in a tissue promotes ordering in hexagonal cell packing

(2013) Kaoru Sugimura et al.   DEVELOPMENT

Precocious Acquisition of Neuroepithelial Character in the Eye Field Underlies the Onset of Eye Morphogenesis

(2013) Kenzo Ivanovitch et al.   DEVELOPMENTAL CELL

Cytosystems dynamics in self-organization of tissue architecture

(2013) Yoshiki Sasai   NATURE

Planar Cell Polarity Links Axes of Spatial Dynamics in Neural-Tube Closure

(2012) Tamako Nishimura et al.   CELL

Quantitative in vivo imaging of embryonic development: Opportunities and challenges

(2012) Chelsea L. Gregg et al.   DIFFERENTIATION

Bayesian inference of force dynamics during morphogenesis

(2012) Shuji Ishihara et al.   JOURNAL OF THEORETICAL BIOLOGY

Fluorescence microscopy for simultaneous observation of 3D orientation and movement and its application to quantum rod-tagged myosin V

(2012) M. Ohmachi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanical Control of Morphogenesis by Fat/Dachsous/Four-Jointed Planar Cell Polarity Pathway

(2012) F. Bosveld et al.   SCIENCE

A complex choreography of cell movements shapes the vertebrate eye

(2011) K. M. Kwan et al.   DEVELOPMENT

Cell Flow Reorients the Axis of Planar Polarity in the Wing Epithelium of Drosophila

(2010) Benoît Aigouy et al.   CELL

Myosin II Dynamics Are Regulated by Tension in Intercalating Cells

(2009) Rodrigo Fernandez-Gonzalez et al.   DEVELOPMENTAL CELL

Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche

(2009) Toshiro Sato et al.   NATURE

Tissue tectonics: morphogenetic strain rates, cell shape change and intercalation

(2009) Guy B Blanchard et al.   NATURE METHODS

Dynamic Coupling of Pattern Formation and Morphogenesis in the Developing Vertebrate Retina

(2009) Alexander Picker et al.   PLOS BIOLOGY

Preparation and Characterization of Highly Fluorescent, Glutathione-coated Near Infrared Quantum Dots for in Vivo Fluorescence Imaging

(2008) Takashi Jin et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Nature and anisotropy of cortical forces orienting Drosophila tissue morphogenesis

(2008) Matteo Rauzi et al.   NATURE CELL BIOLOGY