Genetic diversity, population structure, and linkage disequilibrium of elite and local apple accessions from Belgium using the IRSC array

The Arabidopsis O-fucosyltransferase SPINDLY activates nuclear growth repressor DELLA

(2017) Rodolfo Zentella et al.   Nature Chemical Biology

High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development

(2017) Nicolas Daccord et al.   NATURE GENETICS

Unravelling genetic diversity and cultivar parentage in the Danish apple gene bank collection

(2017) Bjarne Larsen et al.   Tree Genetics & Genomes

Elucidation of the ‘Honeycrisp’ pedigree through haplotype analysis with a multi-family integrated SNP linkage map and a large apple (Malus×domestica) pedigree-connected SNP data set

(2017) Nicholas P Howard et al.   Horticulture Research

Analysis of the genetic diversity and structure across a wide range of germplasm reveals prominent gene flow in apple at the European level

(2016) Jorge Urrestarazu et al.   BMC PLANT BIOLOGY

A Unique haplotype found in apple accessions exhibiting early bud-break could serve as a marker for breeding apples with low chilling requirements

(2016) Taly Trainin et al.   MOLECULAR BREEDING

Development and validation of the Axiom®Apple480K SNP genotyping array

(2016) Luca Bianco et al.   PLANT JOURNAL

Genetic Diversity, Population Structure, Parentage Analysis, and Construction of Core Collections in the French Apple Germplasm Based on SSR Markers

(2016) Ludivine Lassois et al.   PLANT MOLECULAR BIOLOGY REPORTER

Genetic diversity in ancient apple germplasm from northwest Italy

(2016) M. Cavanna et al.   JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY

Auxin activity: Past, present, and future

(2015) Tara A. Enders et al.   AMERICAN JOURNAL OF BOTANY

Genomic basis of the differences between cider and dessert apple varieties

(2015) Diane Leforestier et al.   Evolutionary Applications

Polyploid and aneuploid detection in apple using a single nucleotide polymorphism array

(2015) David Chagné et al.   Tree Genetics & Genomes

The Arabidopsis SWI2/SNF2 Chromatin Remodeler BRAHMA Regulates Polycomb Function during Vegetative Development and Directly Activates the Flowering Repressor Gene SVP

(2015) Chenlong Li et al.   PLoS Genetics

Multiple pathways regulate shoot branching

(2015) Catherine Rameau et al.   Frontiers in Plant Science

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

Small Ubiquitin-like Modifier Protein SUMO Enables Plants to Control Growth Independently of the Phytohormone Gibberellin

(2014) Lucio Conti et al.   DEVELOPMENTAL CELL

Utilization of crop heterosis: a review

(2014) Donghui Fu et al.   EUPHYTICA

Molecular-level and trait-level differentiation between the cultivated apple (Malus× domestica Borkh.) and its main progenitor Malus sieversii

(2014) Satish Kumar et al.   Plant Genetic Resources-Characterization and Utilization

Genetic Diversity, Population Structure and Construction of a Core Collection of Apple Cultivars from Italian Germplasm

(2014) Wei Liang et al.   PLANT MOLECULAR BIOLOGY REPORTER

Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)

(2014) Luca Bianco et al.   PLoS One

Analysis of the genetic diversity of local apple cultivars from mountainous areas from Aragon (Northeastern Spain)

(2014) Ana Pina et al.   SCIENTIA HORTICULTURAE

A consensus ‘Honeycrisp’ apple (Malus × domestica) genetic linkage map from three full-sib progeny populations

(2014) Matthew D. Clark et al.   Tree Genetics & Genomes

Characterizing genic and nongenic molecular markers: comparison of microsatellites and SNPs

(2013) Jacquelin DeFaveri et al.   Molecular Ecology Resources

Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin

(2013) Michela Troggio et al.   PLoS One

‘Schmidt's Antonovka’ is identical to ‘Common Antonovka’, an apple cultivar widely used in Russia in breeding for biotic and abiotic stresses

(2013) Anna Pikunova et al.   Tree Genetics & Genomes

The domestication and evolutionary ecology of apples

(2013) Amandine Cornille et al.   TRENDS IN GENETICS

Gibberellin biosynthesis and its regulation

(2012) Peter Hedden et al.   BIOCHEMICAL JOURNAL

Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array

(2012) Laima Antanaviciute et al.   BMC GENOMICS

Association mapping in forest trees and fruit crops

(2012) M. A. Khan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple

(2012) David Chagné et al.   PLoS One

A high-throughput SNP marker system for parental polymorphism screening, and diversity analysis in common bean (Phaseolus vulgaris L.)

(2012) Matthew W. Blair et al.   THEORETICAL AND APPLIED GENETICS

Genetic diversity and structure of local apple cultivars from Northeastern Spain assessed by microsatellite markers

(2012) Jorge Urrestarazu et al.   Tree Genetics & Genomes

New Insight into the History of Domesticated Apple: Secondary Contribution of the European Wild Apple to the Genome of Cultivated Varieties

(2012) Amandine Cornille et al.   PLoS Genetics

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

The Arabidopsis PRC1-like ring-finger proteins are necessary for repression of embryonic traits during vegetative growth

(2010) Donghong Chen et al.   CELL RESEARCH

SQUAMOSA Promoter-Binding Protein-Like Transcription Factors: Star Players for Plant Growth and Development

(2010) Xiaobo Chen et al.   Journal of Integrative Plant Biology

Genotyping of pedigreed apple breeding material with a genome-covering set of SSRs: trueness-to-type of cultivars and their parentages

(2010) K. M. Evans et al.   MOLECULAR BREEDING

Mixed linear model approach adapted for genome-wide association studies

(2010) Zhiwu Zhang et al.   NATURE GENETICS

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

ArabidopsisSmall Ubiquitin-Like Modifier Paralogs Have Distinct Functions in Development and Defense

(2010) Harrold A. van den Burg et al.   PLANT CELL

Rapid Genomic Characterization of the Genus Vitis

(2010) Sean Myles et al.   PLoS One

Molecular mechanisms of polyploidy and hybrid vigor

(2010) Z. Jeffrey Chen   TRENDS IN PLANT SCIENCE

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Molecular Basis of Plant Architecture

(2008) Yonghong Wang et al.   Annual Review of Plant Biology

Molecular characterisation of indigenous Swedish apple cultivars based on SSR and S-allele analysis

(2008) L. Garkava-Gustavsson et al.   HEREDITAS

The Plant TPX2 Protein Regulates Prospindle Assembly before Nuclear Envelope Breakdown

(2008) J. W. Vos et al.   PLANT CELL

A Novel RNA-Binding Protein Associated with Cell Plate Formation

(2008) L. Ma et al.   PLANT PHYSIOLOGY

A reference integrated map for cultivated grapevine (Vitis vinifera L.) from three crosses, based on 283 SSR and 501 SNP-based markers

(2008) Silvia Vezzulli et al.   THEORETICAL AND APPLIED GENETICS