Genomic prediction of starch content and chipping quality in tetraploid potato using genotyping-by-sequencing

Genomic Selection Accuracy using Multifamily Prediction Models in a Wheat Breeding Program

(2017) Elliot L. Heffner et al.   Plant Genome

Identification and reproducibility of diagnostic DNA markers for tuber starch and yield optimization in a novel association mapping population of potato (Solanum tuberosum L.)

(2016) E. M. Schönhals et al.   THEORETICAL AND APPLIED GENETICS

Improving Genetic Gain with Genomic Selection in Autotetraploid Potato

(2016) Anthony T. Slater et al.   Plant Genome

Software for Genome-Wide Association Studies in Autopolyploids and Its Application to Potato

(2016) Umesh R. Rosyara et al.   Plant Genome

Biotech Potatoes in the 21st Century: 20 Years Since the First Biotech Potato

(2015) Dennis Halterman et al.   AMERICAN JOURNAL OF POTATO RESEARCH

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Improving cold storage and processing traits in potato through targeted gene knockout

(2015) Benjamin M. Clasen et al.   PLANT BIOTECHNOLOGY JOURNAL

Estimating genomic heritabilities at the level of family-pool samples of perennial ryegrass using genotyping-by-sequencing

(2015) Bilal Hassan Ashraf et al.   THEORETICAL AND APPLIED GENETICS

Assessing Genomic Selection Prediction Accuracy in a Dynamic Barley Breeding Population

(2015) A. H. Sallam et al.   Plant Genome

Genomic Selection for Predicting Head Blight Resistance in a Wheat Breeding Program

(2015) Marcio P. Arruda et al.   Plant Genome

Genomic Heritability: What Is It?

(2015) Gustavo de los Campos et al.   PLoS Genetics

Genomic selection accuracies within and between environments and small breeding groups in white spruce

(2014) Jean Beaulieu et al.   BMC GENOMICS

Using Genotyping-By-Sequencing (GBS) for Genomic Discovery in Cultivated Oat

(2014) Yung-Fen Huang et al.   PLoS One

Improving breeding efficiency in potato using molecular and quantitative genetics

(2014) Anthony T. Slater et al.   THEORETICAL AND APPLIED GENETICS

Identification of agronomically important QTL in tetraploid potato cultivars using a marker–trait association analysis

(2014) Björn B. D’hoop et al.   THEORETICAL AND APPLIED GENETICS

Association studies using family pools of outcrossing crops based on allele-frequency estimates from DNA sequencing

(2014) Bilal H. Ashraf et al.   THEORETICAL AND APPLIED GENETICS

SNPs in Genes Functional in Starch-Sugar Interconversion Associate with Natural Variation of Tuber Starch and Sugar Content of Potato ( Solanum tuberosum L.)

(2014) Lena Schreiber et al.   G3-Genes Genomes Genetics

Genotyping-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding

(2014) Jiangfeng He et al.   Frontiers in Plant Science

Novel candidate genes influencing natural variation in potato tuber cold sweetening identified by comparative proteomics and association mapping

(2013) Matthias Fischer et al.   BMC PLANT BIOLOGY

Priors in Whole-Genome Regression: The Bayesian Alphabet Returns

(2013) D. Gianola   GENETICS

An Improved Genotyping by Sequencing (GBS) Approach Offering Increased Versatility and Efficiency of SNP Discovery and Genotyping

(2013) Humira Sonah et al.   PLoS One

A Next-Generation Sequencing Method for Genotyping-by-Sequencing of Highly Heterozygous Autotetraploid Potato

(2013) Jan G. A. M. L. Uitdewilligen et al.   PLoS One

Impact of Marker Ascertainment Bias on Genomic Selection Accuracy and Estimates of Genetic Diversity

(2013) Nicolas Heslot et al.   PLoS One

Validation of candidate gene markers for marker-assisted selection of potato cultivars with improved tuber quality

(2013) Li Li et al.   THEORETICAL AND APPLIED GENETICS

Improving the analysis of low heritability complex traits for enhanced genetic gain in potato

(2013) Anthony T. Slater et al.   THEORETICAL AND APPLIED GENETICS

Resource Allocation for Maximizing Prediction Accuracy and Genetic Gain of Genomic Selection in Plant Breeding: A Simulation Experiment

(2013) Aaron J. Lorenz   G3-Genes Genomes Genetics

Construction of Reference Chromosome-Scale Pseudomolecules for Potato: Integrating the Potato Genome with Genetic and Physical Maps

(2013) Sanjeev Kumar Sharma et al.   G3-Genes Genomes Genetics

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Evaluation and implementation of a potential diagnostic molecular marker for H1-conferred potato cyst nematode resistance in potato (Solanum tuberosum L.)

(2012) Lee Schultz et al.   PLANT BREEDING

Crops that feed the world 8: Potato: are the trends of increased global production sustainable?

(2012) Paul R. J. Birch et al.   Food Security

Genotyping-by-Sequencing for Plant Breeding and Genetics

(2012) Jesse A. Poland et al.   Plant Genome

Application of Molecular Marker-Assisted Selection (MAS) for Disease Resistance in a Practical Potato Breeding Programme

(2012) Felisa Ortega et al.   POTATO RESEARCH

Association mapping of cold-induced sweetening in potato using historical phenotypic data

(2011) S.J. Baldwin et al.   ANNALS OF APPLIED BIOLOGY

Extension of the bayesian alphabet for genomic selection

(2011) David Habier et al.   BMC BIOINFORMATICS

Genomic selection in plant breeding: from theory to practice

(2011) J.-L. Jannink et al.   Briefings in Functional Genomics

Acrylamide formation in fried potato products – Present and future, a critical review on mitigation strategies

(2011) Raquel Medeiros Vinci et al.   FOOD CHEMISTRY

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

A Large Maize (Zea mays L.) SNP Genotyping Array: Development and Germplasm Genotyping, and Genetic Mapping to Compare with the B73 Reference Genome

(2011) Martin W. Ganal et al.   PLoS One

Accuracy and Training Population Design for Genomic Selection on Quantitative Traits in Elite North American Oats

(2011) Franco G. Asoro et al.   Plant Genome

The Statistics of Bulk Segregant Analysis Using Next Generation Sequencing

(2011) Paul M. Magwene et al.   PLoS Computational Biology

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Centromeres Convert but Don't Cross

(2010) Paul B. Talbert et al.   PLOS BIOLOGY

Validation and Implementation of Marker-Assisted Selection (MAS) for PVY Resistance (Ry adg gene) in a Tetraploid Potato Breeding Program

(2009) Ryon J. Ottoman et al.   AMERICAN JOURNAL OF POTATO RESEARCH

Improving the yield, processing quality and disease and pest resistance of potatoes by genotypic recurrent selection

(2009) John E. Bradshaw et al.   EUPHYTICA

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Natural DNA variation at candidate loci is associated with potato chip color, tuber starch content, yield and starch yield

(2008) Li Li et al.   THEORETICAL AND APPLIED GENETICS