Taxon sampling to address an ancient rapid radiation: a supermatrix phylogeny of early brachyceran flies (Diptera)

Anchored enrichment dataset for true flies (order Diptera) reveals insights into the phylogeny of flower flies (family Syrphidae)

(2016) Andrew Donovan Young et al.   BMC EVOLUTIONARY BIOLOGY

Diverse Orthorrhaphan Flies (Insecta: Diptera: Brachycera) in Amber From the Cretaceous of Myanmar: Brachycera in Cretaceous Amber, Part VII

(2016) David A. Grimaldi   BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY

A supermatrix phylogeny of corvoid passerine birds (Aves: Corvides)

(2016) Knud Andreas Jønsson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Power, resolution and bias: recent advances in insect phylogeny driven by the genomic revolution

(2016) David K Yeates et al.   Current Opinion in Insect Science

Building the avian tree of life using a large-scale, sparse supermatrix

(2015) J. Gordon Burleigh et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogeny, divergence times and biogeography of window flies (Scenopinidae) and the therevoid clade (Diptera: Asiloidea)

(2015) SHAUN L. WINTERTON et al.   SYSTEMATIC ENTOMOLOGY

Molecular phylogeny of the horse flies: a framework for renewing tabanid taxonomy

(2015) SHELAH I. MORITA et al.   SYSTEMATIC ENTOMOLOGY

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Phylogenomics resolves the timing and pattern of insect evolution

(2014) B. Misof et al.   SCIENCE

A large-scale molecular phylogeny of flesh flies (Diptera: Sarcophagidae)

(2014) MARCIN PIWCZYŃSKI et al.   SYSTEMATIC ENTOMOLOGY

Higher level molecular phylogeny of darkling beetles (Coleoptera: Tenebrionidae)

(2014) GAEL J. KERGOAT et al.   SYSTEMATIC ENTOMOLOGY

Selecting informative subsets of sparse supermatrices increases the chance to find correct trees

(2013) Bernhard Misof et al.   BMC BIOINFORMATICS

The bee tree of life: a supermatrix approach to apoid phylogeny and biogeography

(2013) Shannon M Hedtke et al.   BMC EVOLUTIONARY BIOLOGY

Male terminalia of Diptera (Insecta): a review of evolutionary trends, homology and phylogenetic implications

(2013) Bradley J. Sinclair et al.   INSECT SYSTEMATICS & EVOLUTION

Decisive Data Sets in Phylogenomics: Lessons from Studies on the Phylogenetic Relationships of Primarily Wingless Insects

(2013) Emiliano Dell’Ampio et al.   MOLECULAR BIOLOGY AND EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The evolution and biogeography of the austral horse fly tribe Scionini (Diptera: Tabanidae: Pangoniinae) inferred from multiple mitochondrial and nuclear genes

(2013) B.D. Lessard et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Building the Coleoptera tree-of-life for >8000 species: composition of public DNA data and fit with Linnaean classification

(2013) LADISLAV BOCAK et al.   SYSTEMATIC ENTOMOLOGY

Adaptations for nectar-feeding in the mouthparts of long-proboscid flies (Nemestrinidae: Prosoeca)

(2012) Florian Karolyi et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Using Supermatrices for Phylogenetic Inquiry: An Example Using the Sedges

(2012) Cody E. Hinchliff et al.   SYSTEMATIC BIOLOGY

The phylogenetic relationships among infraorders and superfamilies of Diptera based on morphological evidence

(2012) CHRISTINE L. LAMBKIN et al.   SYSTEMATIC ENTOMOLOGY

Angiosperm phylogeny: 17 genes, 640 taxa

(2011) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Advances in Insect Phylogeny at the Dawn of the Postgenomic Era

(2011) Michelle D. Trautwein et al.   Annual Review of Entomology

The taming of an impossible child: a standardized all-in approach to the phylogeny of Hymenoptera using public database sequences

(2011) Ralph S Peters et al.   BMC BIOLOGY

Phylogeny of Asilidae Inferred from Morphological Characters of Imagines (Insecta: Diptera: Brachycera: Asiloidea)

(2011) TORSTEN DIKOW   BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY

Episodic radiations in the fly tree of life

(2011) B. M. Wiegmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification

(2011) R. W. Meredith et al.   SCIENCE

Phylogenomics with incomplete taxon coverage: the limits to inference

(2010) Michael J Sanderson et al.   BMC EVOLUTIONARY BIOLOGY

SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information

(2010) Gaurav Vaidya et al.   CLADISTICS

A supermatrix-based molecular phylogeny of the family Drosophilidae

(2010) KIM VAN DER LINDE et al.   Genetics Research

A multigene phylogeny of the fly superfamily Asiloidea (Insecta): Taxon sampling and additional genes reveal the sister-group to all higher flies (Cyclorrhapha)

(2010) Michelle D. Trautwein et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Morphological phylogeny of the variable fly family Stratiomyidae (Insecta, Diptera)

(2010) Colin A. Brammer et al.   ZOOLOGICA SCRIPTA

Characterizing phylogenetically decisive taxon coverage

(2009) Mike Steel et al.   APPLIED MATHEMATICS LETTERS

Mega-phylogeny approach for comparative biology: an alternative to supertree and supermatrix approaches

(2009) Stephen A Smith et al.   BMC EVOLUTIONARY BIOLOGY

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

A phylogenetic hypothesis for Asilidae based on a total evidence analysis of morphological and DNA sequence data (Insecta: Diptera: Brachycera: Asiloidea)

(2009) Torsten Dikow   ORGANISMS DIVERSITY & EVOLUTION

Sparse Supermatrices for Phylogenetic Inference: Taxonomy, Alignment, Rogue Taxa, and the Phylogeny of Living Turtles

(2009) Robert C. Thomson et al.   SYSTEMATIC BIOLOGY

A novel supermatrix approach improves resolution of phylogenetic relationships in a comprehensive sample of danthonioid grasses

(2008) Michael D. Pirie et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION