SPF45-related splicing factor for phytochrome signaling promotes photomorphogenesis by regulating pre-mRNA splicing inArabidopsis

Light Regulation of Alternative Pre-mRNA Splicing in Plants

(2017) Hangxiao Zhang et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

The ArabidopsissickleMutant Exhibits Altered Circadian Clock Responses to Cool Temperatures and Temperature-Dependent Alternative Splicing

(2016) Carine M. Marshall et al.   PLANT CELL

Evidence that phytochrome functions as a protein kinase in plant light signalling

(2016) Ah-Young Shin et al.   Nature Communications

Mechanisms and Regulation of Alternative Pre-mRNA Splicing

(2015) Yeon Lee et al.   Annual Review of Biochemistry

Genome wide comparative analysis of the effects of PRMT5 and PRMT4/CARM1 arginine methyltransferases on the Arabidopsis thaliana transcriptome

(2015) Carlos E Hernando et al.   BMC GENOMICS

Acute Effects of Light on Alternative Splicing in Light-Grown Plants

(2015) Estefania Mancini et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms

(2015) Rubén Gustavo Schlaen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Illuminating Progress in Phytochrome-Mediated Light Signaling Pathways

(2015) Xiaosa Xu et al.   TRENDS IN PLANT SCIENCE

CUL4 forms an E3 ligase with COP1 and SPA to promote light-induced degradation of PIF1

(2015) Ling Zhu et al.   Nature Communications

Gene Expression Regulation in Photomorphogenesis from the Perspective of the Central Dogma

(2014) Shu-Hsing Wu   Annual Review of Plant Biology

Alternative splicing and nonsense-mediated decay of circadian clock genes under environmental stress conditions in Arabidopsis

(2014) Young-Ju Kwon et al.   BMC PLANT BIOLOGY

Context-dependent control of alternative splicing by RNA-binding proteins

(2014) Xiang-Dong Fu et al.   NATURE REVIEWS GENETICS

A day in the life of the spliceosome

(2014) A. Gregory Matera et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Molecular mechanisms for mediating light-dependent nucleo/cytoplasmic partitioning of phytochrome photoreceptors

(2014) Cornelia Klose et al.   NEW PHYTOLOGIST

PIFs: Systems Integrators in Plant Development

(2014) P. Leivar et al.   PLANT CELL

Phytochrome controls alternative splicing to mediate light responses inArabidopsis

(2014) Hiromasa Shikata et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A mutually assured destruction mechanism attenuates light signaling in Arabidopsis

(2014) W. Ni et al.   SCIENCE

A Chloroplast Retrograde Signal Regulates Nuclear Alternative Splicing

(2014) E. Petrillo et al.   SCIENCE

Phosphorylation of the alternative mRNA splicing factor 45 (SPF45) by Clk1 regulates its splice site utilization, cell migration and invasion

(2013) Yuying Liu et al.   NUCLEIC ACIDS RESEARCH

Complexity of the Alternative Splicing Landscape in Plants

(2013) A. S. N. Reddy et al.   PLANT CELL

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Mitogen-Activated Protein Kinase Phosphorylation of Splicing Factor 45 (SPF45) Regulates SPF45 Alternative Splicing Site Utilization, Proliferation, and Cell Adhesion

(2012) A. M. Al-Ayoubi et al.   MOLECULAR AND CELLULAR BIOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Mutation ofArabidopsis SPLICEOSOMAL TIMEKEEPER LOCUS1Causes Circadian Clock Defects

(2012) Matthew A. Jones et al.   PLANT CELL

SKIP Is a Component of the Spliceosome Linking Alternative Splicing and the Circadian Clock in Arabidopsis

(2012) X. Wang et al.   PLANT CELL

The RS domain of Arabidopsis splicing factor RRC1 is required for phytochrome B signal transduction

(2012) Hiromasa Shikata et al.   PLANT JOURNAL

Phytochrome B inhibits binding of phytochrome-interacting factors to their target promoters

(2012) Eunae Park et al.   PLANT JOURNAL

The ELF4–ELF3–LUX complex links the circadian clock to diurnal control of hypocotyl growth

(2011) Dmitri A. Nusinow et al.   NATURE

Localization and Dynamics of Nuclear Speckles in Plants

(2011) A. S. N. Reddy et al.   PLANT PHYSIOLOGY

Photobodies in Light Signaling

(2011) E. K. Van Buskirk et al.   PLANT PHYSIOLOGY

Perception of UV-B by the Arabidopsis UVR8 Protein

(2011) L. Rizzini et al.   SCIENCE

A methyl transferase links the circadian clock to the regulation of alternative splicing

(2010) Sabrina E. Sanchez et al.   NATURE

Type II protein arginine methyltransferase 5 (PRMT5) is required for circadian period determination in Arabidopsis thaliana

(2010) S. Hong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SHOREmap: simultaneous mapping and mutation identification by deep sequencing

(2009) Korbinian Schneeberger et al.   NATURE METHODS

Obligate Heterodimerization of Arabidopsis Phytochromes C and E and Interaction with the PIF3 Basic Helix-Loop-Helix Transcription Factor

(2009) T. Clack et al.   PLANT CELL

Decoding of Light Signals by Plant Phytochromes and Their Interacting Proteins

(2008) Gabyong Bae et al.   Annual Review of Plant Biology

Noncoding Transcription by RNA Polymerase Pol IVb/Pol V Mediates Transcriptional Silencing of Overlapping and Adjacent Genes

(2008) Andrzej T. Wierzbicki et al.   CELL

Transposing phytochrome into the nucleus

(2008) Christian Fankhauser et al.   TRENDS IN PLANT SCIENCE