Acute Effects of Light on Alternative Splicing in Light-Grown Plants

Photoperiodic Flowering: Time Measurement Mechanisms in Leaves

(2015) Young Hun Song et al.   Annual Review of Plant Biology

Sensing the light environment in plants: photoreceptors and early signaling steps

(2015) Vinicius Costa Galvão et al.   CURRENT OPINION IN NEUROBIOLOGY

Functional Splicing Network Reveals Extensive Regulatory Potential of the Core Spliceosomal Machinery

(2015) Panagiotis Papasaikas et al.   MOLECULAR CELL

Phytochrome Signaling: Time to Tighten up the Loose Ends

(2015) Hai Wang et al.   Molecular Plant

Let there be light: Regulation of gene expression in plants

(2015) Ezequiel Petrillo et al.   RNA Biology

Gene Expression Regulation in Photomorphogenesis from the Perspective of the Central Dogma

(2014) Shu-Hsing Wu   Annual Review of Plant Biology

Widespread intron retention in mammals functionally tunes transcriptomes

(2014) Ulrich Braunschweig et al.   GENOME RESEARCH

HUA ENHANCER1 Is Involved in Posttranscriptional Regulation of Positive and Negative Regulators inArabidopsisPhotomorphogenesis

(2014) Huang-Lung Tsai et al.   PLANT CELL

Arabidopsis noncoding RNA mediates control of photomorphogenesis by red light

(2014) Y. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phytochrome controls alternative splicing to mediate light responses inArabidopsis

(2014) Hiromasa Shikata et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Chloroplast Retrograde Signal Regulates Nuclear Alternative Splicing

(2014) E. Petrillo et al.   SCIENCE

Genome-wide analysis of light-regulated alternative splicing mediated by photoreceptors in Physcomitrella patens

(2014) Hshin-Ping Wu et al.   GENOME BIOLOGY

Photoreceptor Signaling Networks in Plant Responses to Shade

(2013) Jorge J. Casal   Annual Review of Plant Biology

Alternative splicing: a pivotal step between eukaryotic transcription and translation

(2013) Alberto R. Kornblihtt et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Translational Landscape of Photomorphogenic Arabidopsis

(2013) M.-J. Liu et al.   PLANT CELL

LNK genes integrate light and clock signaling networks at the core of the Arabidopsis oscillator

(2013) M. L. Rugnone et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intron-centric estimation of alternative splicing from RNA-seq data

(2012) D. D. Pervouchine et al.   BIOINFORMATICS

Widespread translational control contributes to the regulation of Arabidopsis photomorphogenesis

(2012) Ming-Jung Liu et al.   Molecular Systems Biology

The RS domain of Arabidopsis splicing factor RRC1 is required for phytochrome B signal transduction

(2012) Hiromasa Shikata et al.   PLANT JOURNAL

Phytochrome regulates translation of mRNA in the cytosol

(2012) I. Paik et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamic Light Regulation of Translation Status in Arabidopsis thaliana

(2012) Piyada Juntawong et al.   Frontiers in Plant Science

Arabidopsis thaliana life without phytochromes

(2010) B. Strasser et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Analysis of Alternatively Spliced Rice Transcripts Using Microarray Data

(2008) Ki-Hong Jung et al.   Rice