Genomic features of “Candidatus Venteria ishoeyi”, a new sulfur-oxidizing macrobacterium from the Humboldt Sulfuretum off Chile

Beggiatoa leptomitoformis sp. nov., the first freshwater member of the genus capable of chemolithoautotrophic growth

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

A submarine volcanic eruption leads to a novel microbial habitat

(2017) Roberto Danovaro et al.   Nature Ecology & Evolution

Requirements for Pseudomonas aeruginosa Type I-F CRISPR-Cas Adaptation Determined Using a Biofilm Enrichment Assay

(2016) Gary E. Heussler et al.   JOURNAL OF BACTERIOLOGY

Single-cell Sequencing of Thiomargarita Reveals Genomic Flexibility for Adaptation to Dynamic Redox Conditions

(2016) Matthias Winkel et al.   Frontiers in Microbiology

How Clonal Is Clonal? Genome Plasticity across Multicellular Segments of a “Candidatus Marithrix sp.” Filament from Sulfidic, Briny Seafloor Sediments in the Gulf of Mexico

(2016) Verena Salman-Carvalho et al.   Frontiers in Microbiology

Single-Cell (Meta-)Genomics of a Dimorphic Candidatus Thiomargarita nelsonii Reveals Genomic Plasticity

(2016) Beverly E. Flood et al.   Frontiers in Microbiology

Mechanism of foreign DNA recognition by a CRISPR RNA-guided surveillance complex from Pseudomonas aeruginosa

(2015) MaryClare F. Rollins et al.   NUCLEIC ACIDS RESEARCH

antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters

(2015) Tilmann Weber et al.   NUCLEIC ACIDS RESEARCH

Sulfur-cycling fossil bacteria from the 1.8-Ga Duck Creek Formation provide promising evidence of evolution's null hypothesis

(2015) J. William Schopf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A New Subfamily of Polyphosphate Kinase 2 (Class III PPK2) Catalyzes both Nucleoside Monophosphate Phosphorylation and Nucleoside Diphosphate Phosphorylation

(2014) Kei Motomura et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ecophysiology of Thioploca ingrica as revealed by the complete genome sequence supplemented with proteomic evidence

(2014) Hisaya Kojima et al.   ISME Journal

Flocculent layers and bacterial mats in the mudstone interbeds of the Primary Lower Gypsum unit (Tertiary Piedmont basin, NW Italy): Archives of palaeoenvironmental changes during the Messinian salinity crisis

(2014) Francesco Dela Pierre et al.   MARINE GEOLOGY

Nitrate Reduction Functional Genes and Nitrate Reduction Potentials Persist in Deeper Estuarine Sediments. Why?

(2014) Sokratis Papaspyrou et al.   PLoS One

Terpene synthases are widely distributed in bacteria

(2014) Yuuki Yamada et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Las grandes bacterias del Sulfureto de Humboldt

(2014) Víctor Ariel Gallardo et al.   GAYANA

Macplocimine A, a new 18-membered macrolide isolated from the filamentous sulfur bacteria Thioploca sp.

(2013) Xiang Li et al.   JOURNAL OF ANTIBIOTICS

Sulfide oxidation, nitrate respiration, carbon acquisition, and electron transport pathways suggested by the draft genome of a single orange Guaymas Basin Beggiatoa (Cand. Maribeggiatoa) sp. filament

(2013) Barbara J. MacGregor et al.   Marine Genomics

UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota

(2013) J. H. Campbell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2

(2012) Martin Wu et al.   BIOINFORMATICS

The Periplasmic Nitrate Reductase Nap Is Required for Anaerobic Growth and Involved in Redox Control of Magnetite Biomineralization in Magnetospirillum gryphiswaldense

(2012) Yingjie Li et al.   JOURNAL OF BACTERIOLOGY

The Natural Product Domain Seeker NaPDoS: A Phylogeny Based Bioinformatic Tool to Classify Secondary Metabolite Gene Diversity

(2012) Nadine Ziemert et al.   PLoS One

Cytoplasmic Sulfurtransferases in the Purple Sulfur Bacterium Allochromatium vinosum: Evidence for Sulfur Transfer from DsrEFH to DsrC

(2012) Yvonne Stockdreher et al.   PLoS One

Sulfur Respiration in a Marine Chemolithoautotrophic Beggiatoa Strain

(2012) Anne Schwedt et al.   Frontiers in Microbiology

Unusual polyphosphate inclusions observed in a marine Beggiatoa strain

(2011) Jörg Brock et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies

(2011) M. C. Schatz et al.   BRIEFINGS IN BIOINFORMATICS

Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system

(2011) Tomas Sinkunas et al.   EMBO JOURNAL

Microfossils of sulphur-metabolizing cells in 3.4-billion-year-old rocks of Western Australia

(2011) David Wacey et al.   Nature Geoscience

Evolution and classification of the CRISPR–Cas systems

(2011) Kira S. Makarova et al.   NATURE REVIEWS MICROBIOLOGY

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

(2011) Marnix H. Medema et al.   NUCLEIC ACIDS RESEARCH

A single-cell sequencing approach to the classification of large, vacuolated sulfur bacteria

(2011) Verena Salman et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Sulfide induces phosphate release from polyphosphate in cultures of a marine Beggiatoa strain

(2010) Jörg Brock et al.   ISME Journal

Comparative analysis of Beggiatoa from hypersaline and marine environments

(2010) Julia Peixoto de Albuquerque et al.   MICRON

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Physiology and behaviour of marine Thioploca

(2009) Signe Høgslund et al.   ISME Journal

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Genomic sequencing of single microbial cells from environmental samples

(2008) Thomas Ishoey et al.   CURRENT OPINION IN MICROBIOLOGY

Biogeochemistry of sulfur and iron in Thioploca-colonized surface sediments in the upwelling area off central chile

(2008) Jakob Zopfi et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Video-supported Analysis of Beggiatoa Filament Growth, Breakage, and Movement

(2008) Anja Kamp et al.   MICROBIAL ECOLOGY