Structural and dynamic properties of the C-terminal region of the Escherichia coli RNA chaperone Hfq: integrative experimental and computational studies

C-terminal domain of the RNA chaperone Hfq drives sRNA competition and release of target RNA

(2016) Andrew Santiago-Frangos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Balanced Protein–Water Interactions Improve Properties of Disordered Proteins and Non-Specific Protein Association

(2014) Robert B. Best et al.   Journal of Chemical Theory and Computation

Structural model of an mRNA in complex with the bacterial chaperone Hfq

(2014) Yi Peng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Versatile Platform to Analyze Low-Affinity and Transient Protein-Protein Interactions in Living Cells in Real Time

(2014) Yao-Cheng Li et al.   Cell Reports

Recognition of the small regulatory RNA RydC by the bacterial Hfq protein

(2014) Daniela Dimastrogiovanni et al.   eLife

Describing intrinsically disordered proteins at atomic resolution by NMR

(2013) Malene Ringkjøbing Jensen et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Hfq-bridged ternary complex is important for translation activation of rpoS by DsrA

(2013) Weiwei Wang et al.   NUCLEIC ACIDS RESEARCH

Mapping Hfq-RNA interaction surfaces using tryptophan fluorescence quenching

(2013) Kirsten E. Robinson et al.   NUCLEIC ACIDS RESEARCH

Conserved arginines on the rim of Hfq catalyze base pair formation and exchange

(2013) Subrata Panja et al.   NUCLEIC ACIDS RESEARCH

Structure and RNA-binding properties of the bacterial LSm protein Hfq

(2013) Evelyn Sauer   RNA Biology

The bacterial protein Hfq: much more than a mere RNA-binding factor

(2012) Patricio Sobrero et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Coarse-Grained Structure-Based Model for RNA-Protein Complexes Developed by Fluctuation Matching

(2012) Naoto Hori et al.   Journal of Chemical Theory and Computation

Characterization of Vibrio cholerae Hfq Provides Novel Insights into the Role of the Hfq C-Terminal Region

(2012) Helen A. Vincent et al.   JOURNAL OF MOLECULAR BIOLOGY

Structural flexibility of RNA as molecular basis for Hfq chaperone function

(2012) Euripedes de Almeida Ribeiro et al.   NUCLEIC ACIDS RESEARCH

Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition

(2012) E. Sauer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intrinsically disordered proteins: a 10-year recap

(2012) Peter Tompa   TRENDS IN BIOCHEMICAL SCIENCES

Multiscale Ensemble Modeling of Intrinsically Disordered Proteins: p53 N-Terminal Domain

(2011) Tsuyoshi Terakawa et al.   BIOPHYSICAL JOURNAL

Cooperation of Escherichia coli Hfq hexamers in DsrA binding

(2011) W. Wang et al.   GENES & DEVELOPMENT

CafeMol: A Coarse-Grained Biomolecular Simulator for Simulating Proteins at Work

(2011) Hiroo Kenzaki et al.   Journal of Chemical Theory and Computation

Structural analysis of intrinsically disordered proteins by small-angle X-ray scattering

(2011) Pau Bernadó et al.   Molecular BioSystems

Hfq and its constellation of RNA

(2011) Jörg Vogel et al.   NATURE REVIEWS MICROBIOLOGY

Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq

(2011) Mads Beich-Frandsen et al.   NUCLEIC ACIDS RESEARCH

Role of polynucleotide phosphorylase in sRNA function in Escherichia coli

(2011) N. De Lay et al.   RNA

RNAs actively cycle on the Sm-like protein Hfq

(2010) A. Fender et al.   GENES & DEVELOPMENT

Transient Protein-Protein Interactions: Structural, Functional, and Network Properties

(2010) James R. Perkins et al.   STRUCTURE

Structure of Escherichia coli Hfq bound to polyriboadenylate RNA

(2009) T. M. Link et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

P-LINCS:  A Parallel Linear Constraint Solver for Molecular Simulation

(2007) Berk Hess   Journal of Chemical Theory and Computation